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SCNpilot_expt_300_bf_scaffold_2281_curated_2

Organism: scnpilot_dereplicated_Actinobacteria_2

partial RP 28 / 55 BSCG 30 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(248..1756)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI0003649EB1 similarity UNIREF
DB: UNIREF100
  • Identity: 43.3
  • Coverage: 534.0
  • Bit_score: 388
  • Evalue 8.30e-105
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 525.0
  • Bit_score: 381
  • Evalue 4.20e-103
ABC transporter related protein {ECO:0000313|EMBL:ADP83541.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 525.0
  • Bit_score: 381
  • Evalue 1.90e-102

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1509
GTGGCTGAGACCCCGCTGCTCGCCGCCCAGGACCTGACCGTCCGCTTCGGTGGCCACGTCGCCGTCTCCGACGTCGGGCTGCAGGTCCGCGCCGGTGCCATCACCGGGCTCATCGGCCCGAACGGGGCCGGGAAGACCACCACCTTCAACGCGCTGTGCGGCCTCCAGTCGGTGGCGCGGGGCCGCGTGCTGCTCGACGGGAAGGACGTGTCGTCGCTGTCGCCGCACAAGCGGGCCCGCCTCGGCCTGGGCCGGACGTTCCAGCGGCTCGAGACGTTCTCGCTGCTGACCGTGCGGGAGAACGTGCTGGTGGGTGCCGAGTTCCGCCGCTCCAGCCGATCGGGCGAGTCCGCCGCGGCCATGACGGACCGCCTGCTCGGCCAGCTCGGCCTCGAGGACGTGGCCGACGAGCGCGTCGACGGGCTGCCCACCGGCCGGGCCCGCCTGGTGGAGGTGGCCCGCGCCCTGGCCAACGAGCCCCGGGTGCTGCTGCTCGACGAACCGTCATCGGGCCTGAACGAGGCGGAGACCGCGGAGTTCGCCGCCGTGCTCCACCAGCTCACCGACAGCGGCCTGGCCATCTTGCTGGTCGAGCACGACATGAGCCTGGTGATGAGCGCCTGCGAGGACATCTACGTCCTGGACTTCGGCCGCATCATCGCCTCCGGCGACCCGGCCACCGTGCAGGCCGACGACAAGGTCCGGGCCGCCTACCTGGGCGATGATGACGACGAGCCGGCGCCTCACGTGGCGGTCCACGAGGGTGCGGCCGCGCCCGACCAGGCTGACCGCCGCATGCCCGTGCTGGCGGTCCAGGACGTGGCCGCCGGGTACGGCGACTTCGACGTCATCGACGGCATCAGCTTCGAGGTGGCGGAGGGCGAGGTGTTCGCCCTGCTCGGCCCCAACGGCGCCGGCAAGACCACCACCCTCCGGGTCATCTCCGGGCTGCTGCCAGCCAGCAGCGGCAGCGTCGCCATCTGCGGACGCGGCGTGCTGGGGGCCGACGCCGACGCGCTGGCGCGCGCCGGCGTGTGCACGGTCCCCGAGGGCCGGGGCGTGTTCCCGAACCTGAGCGTGGCCGAGAACCTCTGGATGGCCACCCACACCGGCATCGCCCGCAAGCAGGTGGAGGAGGGGGCGTACGCCCGCTTCCCCCGCCTCGGCGAAAGGCGCAACCAGACCGCCGGCACCCTGTCGGGCGGCGAGCAGCAGATGCTGGCCATGGCCCGGGCGATGGCCACCGATCCGGCGCTGCTCATCCTCGACGAGCTGTCGATGGGCCTCGCCCCGCTGGTGGTCCACGAGCTGTACGAGCAGGTGGGCGCCATCGCCGCCACCGGCATCTCCATCCTCGTGGTGGAGCAGTTCGCCCACGAGGTGCTCGGCGTGGCCGACACCGCGGCGATCATGCTGCACGGCCGCATCGCCACCATCGGGGCCCCGGCCGACGTGGCCGCCGAGCTCGAATCCGCCTACCTCTCCGGCGCCGTCGACCAGCACGGCTGA
PROTEIN sequence
Length: 503
VAETPLLAAQDLTVRFGGHVAVSDVGLQVRAGAITGLIGPNGAGKTTTFNALCGLQSVARGRVLLDGKDVSSLSPHKRARLGLGRTFQRLETFSLLTVRENVLVGAEFRRSSRSGESAAAMTDRLLGQLGLEDVADERVDGLPTGRARLVEVARALANEPRVLLLDEPSSGLNEAETAEFAAVLHQLTDSGLAILLVEHDMSLVMSACEDIYVLDFGRIIASGDPATVQADDKVRAAYLGDDDDEPAPHVAVHEGAAAPDQADRRMPVLAVQDVAAGYGDFDVIDGISFEVAEGEVFALLGPNGAGKTTTLRVISGLLPASSGSVAICGRGVLGADADALARAGVCTVPEGRGVFPNLSVAENLWMATHTGIARKQVEEGAYARFPRLGERRNQTAGTLSGGEQQMLAMARAMATDPALLILDELSMGLAPLVVHELYEQVGAIAATGISILVVEQFAHEVLGVADTAAIMLHGRIATIGAPADVAAELESAYLSGAVDQHG*