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SCNpilot_expt_300_bf_scaffold_3833_curated_3

Organism: scnpilot_dereplicated_Actinobacteria_2

partial RP 28 / 55 BSCG 30 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(2042..2893)

Top 3 Functional Annotations

Value Algorithm Source
Putative Ribonuclease Z {ECO:0000313|EMBL:CCM63379.1}; EC=3.1.26.11 {ECO:0000313|EMBL:CCM63379.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 282.0
  • Bit_score: 308
  • Evalue 1.10e-80
Putative Ribonuclease Z n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YXZ8_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 282.0
  • Bit_score: 308
  • Evalue 8.10e-81
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 292.0
  • Bit_score: 281
  • Evalue 2.50e-73

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Taxonomy

Candidatus Microthrix parvicella → Candidatus Microthrix → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 852
ATGGTGAACGTCACGTTCTGGGGGGTACGGGGGTCGACCCCCTGTCCGTGCGACGCCAACAAGCGCTACGGCGGCAACACCGCGTGCGTCAGCCTGGAGGCTCCCGGCCAGGACCCCATCCTGTTCGACCTCGGCACCGGGCTCCGCTTCTTCGGTGAGTCGCTCCCGGCCGACGAGGTGTTCCGCGGCATCTCCCTCGTCACGCACCTGCACTGGGACCACGTGCAGGGCCTCCCGTTCTTCACCCCGATCAACCGGCCCGGTGCCAAGCTCACCGTGTGCGGCCGCAACGACGAGGGCACCCTGGCCGAGGCGTTCGAGGACTTCATGCGCCCGCCGTACTTCCCGGTGCGCCCCGCCGACCTCTGCGGCGAGATCACGTTCCGCGACACCGACGACGAGACCTTCAAGTTCGGCCGGGCCCGCATCACCGCCGGGAACGTGCCCCACACCGGTGCCACCAACGGCTACCGGGTGGAGCTCGACGGGTTCACCATCGCCTACATCAGCGATCACCAGCAGCCCACCGGGTCCGACGCCATCGAGCCGTCGGTGCTGGCGCTGTGCGACGGTGCCGACCTCGTCATCCACGACGCCCAGTACGAGCCCCACGAGTTCGCGGTGAAGTCCGACTGGGGCCACTGCACCGTGGAGTACGCGGTGCGGGTGGCGGCCGAGGCGGGGGCCAAGCGGCTGGCGCTGTTCCACCACGACCCGTCCCACGGCGACGAGGTCATCGACCGCCTGCTGGTGGAGGCCCGGGGCTTCGCCGAGGGCACCTCGGTGGTCGAGGTCATCGCGGCAGCGGAGGGCACCACGGTGGCGCTCAGCCTGGCGTCGGCTCCGGCCTAG
PROTEIN sequence
Length: 284
MVNVTFWGVRGSTPCPCDANKRYGGNTACVSLEAPGQDPILFDLGTGLRFFGESLPADEVFRGISLVTHLHWDHVQGLPFFTPINRPGAKLTVCGRNDEGTLAEAFEDFMRPPYFPVRPADLCGEITFRDTDDETFKFGRARITAGNVPHTGATNGYRVELDGFTIAYISDHQQPTGSDAIEPSVLALCDGADLVIHDAQYEPHEFAVKSDWGHCTVEYAVRVAAEAGAKRLALFHHDPSHGDEVIDRLLVEARGFAEGTSVVEVIAAAEGTTVALSLASAPA*