ggKbase home page

SCNpilot_expt_300_bf_scaffold_3833_curated_9

Organism: scnpilot_dereplicated_Actinobacteria_2

partial RP 28 / 55 BSCG 30 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(5542..6444)

Top 3 Functional Annotations

Value Algorithm Source
Integral membrane protein n=1 Tax=Rhodococcus sp. EsD8 RepID=N1LYQ1_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 270.0
  • Bit_score: 287
  • Evalue 2.00e-74
Uncharacterized protein {ECO:0000313|EMBL:ETT25396.1}; TaxID=1429046 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 278.0
  • Bit_score: 289
  • Evalue 4.40e-75
amino acid efflux protein; K11939 inner membrane transporter RhtA similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 287.0
  • Bit_score: 277
  • Evalue 5.10e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodococcus rhodochrous → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 903
GTGACCAGCACCGATCGCCCTGGGCGAGGCAGCACCTACCGCCCCGTGGCGCTGGTGCTGGGGTCCATGCTGTCGCTCCAGTTCGGCGCTGCCATCGCCACGCACCTGTTCGACGAGGTCGGGTCGGCGGGCGCGTCGGCCCTCCGGCTGGGGCTGGCGGCGGTGCTGCTGGTGGCCTGGGCCCGTCCGCCGGTGCGCTCCTGGAGCCCGGATCACCGCCGGTCGGTGGTCCTGCTCGGCCTGGCGATGGCGGTCATGAACTTCGCGTTCTACGAGGCCGTGTCCCGGCTGCCGCTCGGCGCCGCCATCACCATCGAGTTCCTCGGGCCGCTGGGCCTGGCGGTGGTGCTCACCCGCCGGCCGCGCGACCTGGTCTTCGTGGCCCTCGCGCTGGCCGGCGTGGCCGCCCTCGGGTTCGGCCAGCAGGGCTCGGACGCCGGGGCGCTCGATCCGATCGGTGTGGCCGCCGCCCTGGTGGCCGCGCTCTTCTGGGCGGCGTACATCCTGGCGGGCTCCCGGCTGGCGGCCACCGATGCCGGCCTGGCGAGCCTGGCCGGGGCGTGCACCGTGGCCGCCGTGCTCGTCGTGCCCATCGGTGTGGCGGCCAACGGCACCGACCTGCTGGACGGGCGGGTCCTGCTGCTCGGCCTGGGCATGGCCGTGCTGGCCTCGGTGATCCCGTACTCGTTCGAGCTGCGGGCGCTGGAGCGGATGGCCAAGCGGACCTTCAGCATCCTCGTGGCGCTCGAGCCCGCCATCGGTGCCCTGGTCGGCGCCGTCCTGCTGGACCAGCACCTGGGGGCGCTGTCGCTCACCGGGATCGCGCTGGTGGTGGCCGCAGGGATCGGCGCCACCGCCACGGCGTCGCCCGGGCAGCCGCCGCTGCTCCCGGACTCGGCCTGA
PROTEIN sequence
Length: 301
VTSTDRPGRGSTYRPVALVLGSMLSLQFGAAIATHLFDEVGSAGASALRLGLAAVLLVAWARPPVRSWSPDHRRSVVLLGLAMAVMNFAFYEAVSRLPLGAAITIEFLGPLGLAVVLTRRPRDLVFVALALAGVAALGFGQQGSDAGALDPIGVAAALVAALFWAAYILAGSRLAATDAGLASLAGACTVAAVLVVPIGVAANGTDLLDGRVLLLGLGMAVLASVIPYSFELRALERMAKRTFSILVALEPAIGALVGAVLLDQHLGALSLTGIALVVAAGIGATATASPGQPPLLPDSA*