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SCNpilot_expt_300_bf_scaffold_2727_curated_1

Organism: scnpilot_dereplicated_Actinobacteria_2

partial RP 28 / 55 BSCG 30 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(3..152)

Top 3 Functional Annotations

Value Algorithm Source
Putative Cysteine--tRNA ligase {ECO:0000313|EMBL:CCM65027.1}; EC=6.1.1.16 {ECO:0000313|EMBL:CCM65027.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 50.0
  • Bit_score: 99
  • Evalue 1.40e-18
Putative Cysteine--tRNA ligase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z718_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 50.0
  • Bit_score: 99
  • Evalue 1.00e-18
mshC; cysteine--1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 48.0
  • Bit_score: 87
  • Evalue 9.50e-16

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Taxonomy

Candidatus Microthrix parvicella → Candidatus Microthrix → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 150
ATGCGCCTCTACGACACCGCTCGGCGGGCGGTCGTGCCCTTCGAGCCCGGACCGCTCGTCACCATGTACACGTGCGGCATCACGCCGTACGACGCCACCCACTTCGGGCACGCGGCCACCTACCTGACCTACGACGTCCTCCAGCGGCGC
PROTEIN sequence
Length: 50
MRLYDTARRAVVPFEPGPLVTMYTCGITPYDATHFGHAATYLTYDVLQRR