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SCNpilot_expt_300_bf_scaffold_1067_curated_26

Organism: scnpilot_dereplicated_Actinobacteria_2

partial RP 28 / 55 BSCG 30 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: 22992..23543

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase ECF subfamily sigma factor n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZWA4_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 34.7
  • Coverage: 150.0
  • Bit_score: 88
  • Evalue 6.50e-15
putative RNA polymerase ECF subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 150.0
  • Bit_score: 88
  • Evalue 2.10e-15
Tax=RBG_16_Actinobacteria_68_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 154.0
  • Bit_score: 121
  • Evalue 1.30e-24

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Taxonomy

RBG_16_Actinobacteria_68_21_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGCGACTCATGTGGCGCACCGCAGTCGCGATCCTCGGAGGTCGCGTCGTACAGGCTTGGGGTCCGGTGCTCTTGATGGGTGTGGAGGCGGTGACCGTGACCGATGACGAGGCGGCGTTCGCGGCGTTCGTGGGCGACGCCGAGCCTCGGCTGCGGCGGGCGTTCACGCTGCTGCGCGGCGCCGACGTGGGCGGCGATGCCACCGCGGAAGCGCTGGCCTGGGCCTGGGAGCACTGGGACCAGCTGCAGGCGATGACCAACCCGGTCGGGTACCTGTACCGGGTGGGCAGCAGCCGGACCCGCTTCCGGGAGGAGCGGTTCCCGCACGCCCCCGCCCCGCCCGATGCGCCCGGGTTCGAGCCGGGCCTGGTGCCGGCGCTCGCCCGGCTCACGGTCCGTCAGCGCACCGCCGTGGTGCTGGTGCACGGCTGCGGGTGGACGCACCAAGAGGTGGCCGACGCCCTGGAGCTGTCGCGGTCGTCAGTCGGGACCCACGTCGAGCGGGCCATGGCGCAGCTGCGCACCGAGCTGGGAGTCGCGACCGATGGATGA
PROTEIN sequence
Length: 184
MRLMWRTAVAILGGRVVQAWGPVLLMGVEAVTVTDDEAAFAAFVGDAEPRLRRAFTLLRGADVGGDATAEALAWAWEHWDQLQAMTNPVGYLYRVGSSRTRFREERFPHAPAPPDAPGFEPGLVPALARLTVRQRTAVVLVHGCGWTHQEVADALELSRSSVGTHVERAMAQLRTELGVATDG*