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SCNpilot_expt_300_bf_scaffold_1828_curated_12

Organism: scnpilot_dereplicated_Actinobacteria_2

partial RP 28 / 55 BSCG 30 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(8659..10272)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI000362A231 similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 541.0
  • Bit_score: 661
  • Evalue 7.10e-187
ATP-binding protein of ABC transporter {ECO:0000313|EMBL:CCM63387.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 541.0
  • Bit_score: 658
  • Evalue 8.50e-186
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 544.0
  • Bit_score: 621
  • Evalue 3.40e-175

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Taxonomy

Candidatus Microthrix parvicella → Candidatus Microthrix → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1614
GACGACAAGTTCACCCAGCTCAGCATCCTGGTGGTGCTCACGGTCGTCATCTGGATCTGCGAGAGCATCACGGAGTACATCGCCGTCGTCACCTGGCGGAACCTGGCCCAGACGGTGGAGCACGAGGCGCGGATGGACACGTACCGCCACGTGCAGGACCTGGAGATGGCCTACTTCGAGGACCGCACGTCGGGCGGGATGATGGCCGTCCTCAACGACGACGTGAACCAGCTCGAGCGGTTCCTGGACCTCGGCCCGCACAAGCTCATCGCCACCGCGGCCAACGTGGTCTTCGTCGGCATCGTGTTCTTCGTCGTGTCCCCGTGGCTGGCGCTGTTCGCGTTCCTCCCGATCCCGATCATCGTGGCCGGCTCGCTCTGGTACCAGACCCGCCTCGAGGCCAAGTACGCCAAGGTCCGGGCGGCGGCGGGCGCCATCAGCGACACCCTCACCAACGCCATCGGCGGCATGGCCACCATCAAGGCGTTCAGCGGGGAGCAGCGGGAGGCCGAGCTGGTCGGGTCGGAGAGCCAGGCGTACGCCGACGCCAACCGGGTGGCCATCCGCTCGTCCACCGCGTTCAACCCGCTGATCCGCATGGCCGTGCTCTCGGGCTTCGCCATGACCCTGCTGGTCGGCGGCCGCATGGCCCTGCGCGGCGAGATGGAGATCGGCGTCTTCTCGATGCTCGTGTACATGACCCAGCGGCTGCTCTGGCCGCTCACCGCGCTGGGCGAGATCTTCGACCTGTACCAGCGGGCGATGGCCTCCTGCCGCCGCATCTTCGGCCTGCTCCAGACCGAGCCCACCATCCACCCGGGGGCGGCCTCGCTGCCCGTCCCGGTCCGCGGCCACGTCTCGTTCGACGACGTGCACTTCTCCTACCTGGAGAACGGTCCGCCGGTGCTGCGGGGCCTGTCGATCGACGTCCCCGCCGGGGAGACGCACGCCATCGTGGGTGCCACCGGCTCCGGCAAGTCCACCGTGGTCAAGCTGCTGCTCCGCCTCTACGAACCCACGGCCGGGACGATCGCCGTCGACGAAGCCCCCATCCAGGGGCTCACGTTCGAGTCGCTGCGCCGGGCCACCGGGTTCGTGGCCCAGGACGTGTTCCTCTTCCACGGGACCATCCGCGACAACCTCACCTACGGCCGCCTCGACGCCACCGACGACGAGATCCGCCGGGCCGCCGAGCTGGCCGAGGCGGCCACGTTCATCGAATCGCTGTCCCACGGGTACGACACGCTGGTCGGTGAGCGGGGCCACAAGCTCTCCGGCGGGCAGCGCCAGCGCCTCACGCTCGCCCGAGCCATCCTGCGCGACCCGGCCATCCTCATCCTCGACGAGGCCACCTCGGCGGTGGACAACGAGACCGAGGCCGCCATCCAGCGCTCGATGGACAAGGTGGCGGTGGGCCGGACCACCATCGTCATCGCCCACCGTCTGTCCACGGTGCGCCACGCCCACCGGATCCACGTGATGGAGGCCGGCCGGGTGGTCGAGGCCGGTACGCACGAGGAGCTGGTGTCGCACGGCGGCCTCTACGCCGCCCTGTGGCGGGTGCAGACGGGCGAGGCCGACCCCACCGGGACCGGCGTCGCCCTGGCCGACTGA
PROTEIN sequence
Length: 538
DDKFTQLSILVVLTVVIWICESITEYIAVVTWRNLAQTVEHEARMDTYRHVQDLEMAYFEDRTSGGMMAVLNDDVNQLERFLDLGPHKLIATAANVVFVGIVFFVVSPWLALFAFLPIPIIVAGSLWYQTRLEAKYAKVRAAAGAISDTLTNAIGGMATIKAFSGEQREAELVGSESQAYADANRVAIRSSTAFNPLIRMAVLSGFAMTLLVGGRMALRGEMEIGVFSMLVYMTQRLLWPLTALGEIFDLYQRAMASCRRIFGLLQTEPTIHPGAASLPVPVRGHVSFDDVHFSYLENGPPVLRGLSIDVPAGETHAIVGATGSGKSTVVKLLLRLYEPTAGTIAVDEAPIQGLTFESLRRATGFVAQDVFLFHGTIRDNLTYGRLDATDDEIRRAAELAEAATFIESLSHGYDTLVGERGHKLSGGQRQRLTLARAILRDPAILILDEATSAVDNETEAAIQRSMDKVAVGRTTIVIAHRLSTVRHAHRIHVMEAGRVVEAGTHEELVSHGGLYAALWRVQTGEADPTGTGVALAD*