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SCNpilot_expt_1000_bf_scaffold_1413_curated_35

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(35614..36597)

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerC n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NU10_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 327.0
  • Bit_score: 591
  • Evalue 4.20e-166
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 327.0
  • Bit_score: 591
  • Evalue 5.90e-166
xerC; site-specific tyrosine recombinase XerC; K03733 integrase/recombinase XerC similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 312.0
  • Bit_score: 518
  • Evalue 1.90e-144

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGGCAAAAGCCGCCAAAGCAAGCCACACGGACAATAGCGAGGCGCAGCTCATTTGCGCCGCGCCGGACCTCATGGCCGAGATCGCGCAATGGCTGTCGCATCTGCGCGCCGAGCGGCGGCTGTCGCCCAAGACGCTGGAAGCCTATGCGCGCGACCTGCGCCAGTGCCTCGCGTTCCTGAGCGAGCATTGGGGCGGCCTCGTGACCCTCAAACAGTTTGCCGCCATCGAGGCCACTGACGTGCGCGCCTTCATGTCGTCCCGCCGCGCCGACGACATCGGTGGACGCTCGCTGATGCGCGCGCTGGCGGGCTTACGTTCGTTCGGTCGATTCCTAGAACGCGAAGGCAAGGGCAAAGTGGGCGCATTGTCCGCGATCCGCGCGCCGAAGATCGGCAAGAGTCTGCCGAAACCAATTCAGATGACGTCGGCAAAGCAGATGACCGATGCGGACATTCGCGCCGGTGAAAACCGCGAGCCATGGATCTGGGCGCGCGATGCCGCGGTGATGGCGCTGCTTTACGGATCGGGCCTGCGCATTTCCGAAGCGCTCGGCCTGATCCGGCGCGATGTGCCGCTGCCCGGACAAGGCGACGTGATCGTAGTCACCGGCAAAGGCAACAAAACGCGCATGGTGCCGGTGCTGCAAACCGTGCTGACGCTGATCACGGACTATGTCACGATGTGCCCGCATGTCATCGCGCCGGATACGCCGATCTTTGTCGGTGCGCGCGGCGGGCCGCTGTCACCCCGCATCATTCAGCTCACGATGGAGCGGCTGCGCGGCGCGCTGGGTCTGCCGGACAGCGCAACGCCGCATGCGCTGCGCCATTCCTTCGCCACGCATCTTCTGAGCCGGGGCGGCGACCTTCGCGCCATTCAGGAATTGCTCGGCCACTCGTCCCTGTCCACGACGCAGATCTACACCGGCGTCGATGCCGACCGGCTGCTTGACGTCTACAAGACGGCCCATCCCCGCGCCTGA
PROTEIN sequence
Length: 328
MAKAAKASHTDNSEAQLICAAPDLMAEIAQWLSHLRAERRLSPKTLEAYARDLRQCLAFLSEHWGGLVTLKQFAAIEATDVRAFMSSRRADDIGGRSLMRALAGLRSFGRFLEREGKGKVGALSAIRAPKIGKSLPKPIQMTSAKQMTDADIRAGENREPWIWARDAAVMALLYGSGLRISEALGLIRRDVPLPGQGDVIVVTGKGNKTRMVPVLQTVLTLITDYVTMCPHVIAPDTPIFVGARGGPLSPRIIQLTMERLRGALGLPDSATPHALRHSFATHLLSRGGDLRAIQELLGHSSLSTTQIYTGVDADRLLDVYKTAHPRA*