name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1413_curated_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..401
|
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase AroA (EC:2.5.1.19); K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1N2_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(405..1091)
|
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13EQ9_RHOPS
hypothetical protein; K09778 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE37430.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1300..1938
|
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cmk; cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14]
cytidylate kinase n=1 Tax=Afipia birgiae RepID=UPI000305197E
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_4
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1954..3399)
|
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AEC2_RHIET
Uncharacterized protein {ECO:0000313|EMBL:EGE57140.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_5
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3750..3872
|
30S ribosomal protein S1 n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0FXT4_9BRAD
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_6
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4120..4887)
|
putative RNA pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Pseudouridine synthase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P2A5_9BRAD
RluA family pseudouridine synthase {ECO:0000313|EMBL:EKS33815.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4940..5887
|
Signal recognition particle receptor FtsY n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4N6_9BRAD
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ftsY; signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_8
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5887..6498
|
Probable intracellular septation protein A n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QGM9_9BRAD
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
ispZ; intracellular septation protein A; K06190 intracellular septation protein
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6495..7094)
|
Thiol:disulfide interchange protein CycY n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXC6_9BRAD
Thiol:disulfide interchange protein CycY {ECO:0000313|EMBL:EKS33811.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
thiol:disulfide interchange protein; K02199 cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7091..7270)
|
hemagglutination activity protein n=1 Tax=Afipia birgiae RepID=UPI0002F8CB76
Heme exporter protein CcmD {ECO:0000313|EMBL:EKS33810.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Heme exporter protein CcmD
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_11
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7270..8001)
|
Cytochrome c-type biogenesis protein CcmC n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QGM5_9BRAD
Cytochrome c-type biogenesis protein CcmC {ECO:0000313|EMBL:EGP09670.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
ccmC; heme exporter protein C; K02195 heme exporter protein C
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8096..8764)
|
Heme exporter protein B n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1L8_9BRAD
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
heme exporter protein CcmB; K02194 heme exporter protein B
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8871..9458)
|
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Cytochrome c biogenesis ATP-binding export protein CcmA n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8A8_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_14
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9700..12420
|
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
acnA; aconitate hydratase; K01681 aconitate hydratase 1 [EC:4.2.1.3]
Aconitate hydratase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXC1_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_15
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12551..13333
|
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8P297_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP09666.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13722..14090
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000305B86F
Uncharacterized protein {ECO:0000313|EMBL:EKS34620.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_17
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14277..15974)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEP4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC40266.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_18
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16072..16602)
|
N-acetyltransferase GCN5; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183]
GCN5-related N-acetyltransferase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QGL9_9BRAD
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EGP09664.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_19
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16783..17574)
|
Membrane protein n=2 Tax=Bradyrhizobiaceae RepID=F7QGL8_9BRAD
Membrane protein {ECO:0000313|EMBL:EGP09663.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein; K06890
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17781..20351)
|
glycosyl transferase family 1 n=1 Tax=Afipia birgiae RepID=UPI0002E34A38
Uncharacterized protein {ECO:0000313|EMBL:EKS34617.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K02004 putative ABC transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_21
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20348..21094)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZI6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33800.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21117..21812
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4M1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34615.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
G-D-S-L lipolytic protein
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_23
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21935..22471
|
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
2',5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-]
2'-5' RNA ligase n=2 Tax=Bradyrhizobiaceae RepID=F7QGL4_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22527..23714
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P898_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34613.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
AFG1-like ATPase; K06916
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_25
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24089..25057
|
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Malate dehydrogenase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NW90_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25176..26372
|
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
succinyl-CoA synthetase subunit beta (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
malate--CoA ligase subunit beta n=1 Tax=Afipia birgiae RepID=UPI00031F8F60
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_27
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26377..27261
|
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
succinyl-CoA synthetase subsunit alpha n=1 Tax=Afipia birgiae RepID=UPI0002E61E9A
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_28
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28331..28870)
|
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZ58_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95947.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_29
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29151..30290
|
sucA; 2-oxoglutarate dehydrogenase componentSucA (EC:1.2.4.2); K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
MFS transporter n=1 Tax=Afipia birgiae RepID=UPI0002F6A2D0
2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:EKS33793.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1413_curated_30
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30401..31645
|
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
sucB; dihydrolipoamide succinyltransferase (EC:2.3.1.61); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex n=2 Tax=Bradyrhizobiaceae RepID=F7QGK7_9BRAD
|