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SCNpilot_expt_1000_bf_scaffold_1413_curated_1

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 3..401

Top 3 Functional Annotations

Value Algorithm Source
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 132.0
  • Bit_score: 250
  • Evalue 1.00e-63
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase AroA (EC:2.5.1.19); K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 131.0
  • Bit_score: 230
  • Evalue 3.20e-58
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1N2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 132.0
  • Bit_score: 250
  • Evalue 7.20e-64

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 399
CGCGGCGTCACCGTGCCGCCGGAGCGCGCGCCATCGATGATCGACGAATATCTCGTGCTCGCGGTCGCCGCCGCGTTCGCAGAAGGCGTCACCACCATGCGTGGATTGCAGGAACTGCGCGTCAAGGAATCCGACCGCCTCGAAGCGACCGTCGACATGCTGCGCGTCAACGGCGTTGAGGTGGAGATTTCCGGCGACGACATGATCGTCAACGGCAAAGGCTATGTGCCGGGCGGCGGCCTTGTCGCCACCCACATGGATCACCGCATCGCCATGTCGGCGCTGGTGATGGGCGCGGCCTCCGATACGCCGGTGAAAATCGACGACACCGGCTTCATCGCCACCAGCTTTCCGGATTTCATTCCGATGATGCGCGGCCTCGGCGCTGATTTTTCCTAA
PROTEIN sequence
Length: 133
RGVTVPPERAPSMIDEYLVLAVAAAFAEGVTTMRGLQELRVKESDRLEATVDMLRVNGVEVEISGDDMIVNGKGYVPGGGLVATHMDHRIAMSALVMGAASDTPVKIDDTGFIATSFPDFIPMMRGLGADFS*