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SCNpilot_expt_1000_bf_scaffold_1413_curated_10

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(7091..7270)

Top 3 Functional Annotations

Value Algorithm Source
hemagglutination activity protein n=1 Tax=Afipia birgiae RepID=UPI0002F8CB76 similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 58.0
  • Bit_score: 94
  • Evalue 3.00e-17
Heme exporter protein CcmD {ECO:0000313|EMBL:EKS33810.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 58.0
  • Bit_score: 91
  • Evalue 6.00e-16
Heme exporter protein CcmD similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 57.0
  • Bit_score: 76
  • Evalue 2.60e-12

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 180
ATGTCGCTCGGTCCTTACACGTCCTTTATCGTCACGTCCTACGCGCTGGTCGCCGCCGTCGTCGCCGCGCTGATCGTGTGGATCGCGCTCGACTATCGCCGGCAGAAGCAGATCCTGCGCGACCTCGAGGCCAGCGGCATCACCCGACGCTCGGCGCAGACATCCGGGTCATCGTCATGA
PROTEIN sequence
Length: 60
MSLGPYTSFIVTSYALVAAVVAALIVWIALDYRRQKQILRDLEASGITRRSAQTSGSSS*