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SCNpilot_expt_1000_bf_scaffold_1413_curated_23

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 21935..22471

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 178.0
  • Bit_score: 334
  • Evalue 7.10e-89
2',5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 178.0
  • Bit_score: 311
  • Evalue 1.90e-82
2'-5' RNA ligase n=2 Tax=Bradyrhizobiaceae RepID=F7QGL4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 178.0
  • Bit_score: 334
  • Evalue 5.10e-89

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGCCTCGCTTGTTCGCCGGATTGGAAATTCCTCCGGATATCGGTCAGTCCCTGTCCATGCTGCGGGGCGGATTGCCGGGAGCGCGCTGGATCGATCCCGAAAATTATCATGTCACCCTGCGCTTCATCGGCGACATCGACGGCGTCTCGGCCAACGAGATCGCCTCGACGCTGGAGCGGATCAACCGCAAACCGTTCGAGGTATCGCTCCGGGGCCTGTCCAGCTTCGGCAGCAAGAAACCGCGCGCTGTGGTGGCATCCGTTGTACCAAGCCGCCCGCTCATGGAACTTCAGGCCGAACTGGAGCGGCTGATCCAGCGCTTCGGCTTCGATCCGGAGGGCCGCAAGTTCATCCCGCATGTCACGCTGGCGCGGCTGCGCGATGCCTCCAATCAGGATGTTGCGGATTATCTGTCGCTGCGCGGCTATTTCCCGGCCCGCACCTTCACAGCGTCCCGTTTCGTGCTGTTCTCCTCGCGTGCCTCGGTCGGCGGCGGCCCCTATGTGGTCGAGGACGCCTATGCGCTGAGCGCCTGA
PROTEIN sequence
Length: 179
MPRLFAGLEIPPDIGQSLSMLRGGLPGARWIDPENYHVTLRFIGDIDGVSANEIASTLERINRKPFEVSLRGLSSFGSKKPRAVVASVVPSRPLMELQAELERLIQRFGFDPEGRKFIPHVTLARLRDASNQDVADYLSLRGYFPARTFTASRFVLFSSRASVGGGPYVVEDAYALSA*