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SCNpilot_expt_1000_bf_scaffold_1413_curated_29

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 29151..30290

Top 3 Functional Annotations

Value Algorithm Source
sucA; 2-oxoglutarate dehydrogenase componentSucA (EC:1.2.4.2); K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 378.0
  • Bit_score: 695
  • Evalue 1.30e-197
MFS transporter n=1 Tax=Afipia birgiae RepID=UPI0002F6A2D0 similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 379.0
  • Bit_score: 724
  • Evalue 6.30e-206
2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:EKS33793.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 379.0
  • Bit_score: 699
  • Evalue 3.10e-198

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1140
GTGCCGGACGGTTTCCGCATTCACCGCACCGTTCAGCGCTTCCTCGATGCGCGCGCCAAGGCGATTGAGACCGGCGAAGGCATCGACTGGGCGACCGGCGAAGCGCTCGCCTTCTGTACACTCCTCAAGGAAAATCATCGCGTCCGTCTGTCCGGCCAGGACTCCGAGCGCGGCACCTTCTCACAGCGTCACTCGGTGGTGTTCGATCAGGAAGACGAAAGCCGCTACACGCCGTTCAACCATCTCGGCGGCGATCAGGGCCATTACGAGGTCATCAACTCGCTGCTGTCGGAAGAAGCGGTGCTCGGTTTCGAGTACGGCTACTCGCTGGCCGAGCCCAAGGCGCTCACCATCTGGGAAGCGCAGTTCGGCGATTTCGCCAACGGCGCGCAGGTGGTGTTCGACCAGTTCATCTCGTCGGGCGAGCGCAAGTGGCTGCGCATGTCCGGCCTCGTCTGCCTGCTGCCGCACGGCTATGAAGGACAGGGTCCGGAGCATTCGTCCGCGCGTCTCGAACGCTTCCTGCAAATGTGCGCCGAAGACAACATGCAGGTCGCCAACCTGACGACGCCCGCGAACTACTTCCACGCGCTGCGCCGCCAGCTTCGCCGCGACATCCGCAAGCCGCTGATCCTGATGACGCCGAAGTCGCTGCTGCGTCACAAGCGCGCCGTGTCGAAGCTCGAGGAGTTCGGTCCGGACACCTCGTTCCATCGCGTGCTGCCCGACGACGCGGAGAAGGGCGGCGAGATCAAGCTGGTCGAGGACGCCAAGATCCGCCGCGTCGTGATCTGCTCGGGCAAGGTCTATTACGATCTTTACGAGGATCGCGAGAAGCGCGGCGTGGACGACATCTACCTGCTGCGCATCGAACAGCTCTATCCGGTGCCGCTCAAGACGCTGGTGCAGGTGCTGGAGCGCTTCAAGCAGGCCGAAGTGGTCTGGTGTCAGGAAGAGCCGCGCAACATGGGCGGCTGGCACTTCATCGAGCCGTATCTCGAATGGGTGCTCAACCAGATCGGCGCGGCGCACAAGCGTCCGCGTTATGCCGGGCGTGCGGCGTCCGCCGCGACGGCGACCGGCCTGATGTCGAAGCATCTGGCGCAGCTCAAGGCATTCCTCGACGAGGCACTCGGTTGA
PROTEIN sequence
Length: 380
VPDGFRIHRTVQRFLDARAKAIETGEGIDWATGEALAFCTLLKENHRVRLSGQDSERGTFSQRHSVVFDQEDESRYTPFNHLGGDQGHYEVINSLLSEEAVLGFEYGYSLAEPKALTIWEAQFGDFANGAQVVFDQFISSGERKWLRMSGLVCLLPHGYEGQGPEHSSARLERFLQMCAEDNMQVANLTTPANYFHALRRQLRRDIRKPLILMTPKSLLRHKRAVSKLEEFGPDTSFHRVLPDDAEKGGEIKLVEDAKIRRVVICSGKVYYDLYEDREKRGVDDIYLLRIEQLYPVPLKTLVQVLERFKQAEVVWCQEEPRNMGGWHFIEPYLEWVLNQIGAAHKRPRYAGRAASAATATGLMSKHLAQLKAFLDEALG*