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SCNpilot_expt_1000_bf_scaffold_1413_curated_20

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(17781..20351)

Top 3 Functional Annotations

Value Algorithm Source
glycosyl transferase family 1 n=1 Tax=Afipia birgiae RepID=UPI0002E34A38 similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 858.0
  • Bit_score: 1396
  • Evalue 0.0
Uncharacterized protein {ECO:0000313|EMBL:EKS34617.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 856.0
  • Bit_score: 1393
  • Evalue 0.0
hypothetical protein; K02004 putative ABC transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 858.0
  • Bit_score: 1245
  • Evalue 0.0

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2571
ATGACCCTTGCAGCAGAGACTTCGCCGCGCGGCGCGACGCCATCGCTGGCGCTGCGTTACGCCTTGCGCGAATTGCGCAGCGGGTTGCGCGGCTTTTATGTATTCATTGCCTGCATCGCACTCGGCGTGATGGCGATCGCGGGCGTCGGCTCGGTGGCGGGCAGCCTCAACCAGGGGCTCGACCGCCAGGGCCGCACGCTGCTCGGCGGCGATGCGTCCTTCGCATTGATCCAGCGCGAAGCTTCGGCCGACGAGCGCGCGTTTCTCGACTCTCGCGGCAAGATCACATCCGCCGCGCTGATGCGCGCGATGGCGAAATCACCAAGCGGCGAGTTCGCGCTGGTCGACCTCAAAGCCGTCGACAGCAACTATCCCCTGCTCGGCAGAGTGGCGCTGTCCCCGCAAATGCCGATGGCCGACCTTCTCGCGCAACAGAACGGCGCTTACGGCGCGGGGGCGGATGCCGTGCTGCTGGCGCGGCTCGGCCTGAAACTCGGCGACCGCGTCACCGTCGGCGCGACGCCGCTTGAAATCCGCGCCGTGGTGAATGCGGAGCCCGACAAGCTCGCGGGCGGCATCGGCCTCGGACCCCGGCTTCTCGTCAGCGAGGATGCGTTGCGCGCCACCGGCCTGTTGCAACCCGGCACGCTGGTGCGCTGGGTCTATCGCGTGCAGCTTCCAGACGCGGGCGGCGAGGAAAGCGCGACACGCGCCCTGATCGCGCAGTCGGAGACCGCGCTGCCGCACGCAGGCTGGGAGGTCCGCACCCGCGACAATGCTTCGCCGCAGCTTGAGCGCAACATCACGCGCTTCTCGCAGTTTCTGACTCTTGTGGGTCTCGCCGCGCTGCTGGTGGGCGGCGTCGGTGTCGCCAATGCGATCAAGAGCCATCTGGACGAGCGGCGCGACGTGATCGCGACCTTCAAGGCGCTCGGCGCGACAGGGCGCGAGGTGTTCACTATTTACCTCGTGCAGGTGCTTGTGCTGGCGCTGCTCGGATCGCTGATCGGCCTTGCCATCGGCGCTGCGCTGCCGTTTGCCATCGCGGGCCTGTTCGGAAAAATCCTGCCGCTGCCGGTCGAGCCGACATTTCACATCGGCGAACTGGCGCTGTCGCTGGTCTATGGCCTGCTGACCGCGCTGGCGTTCAGCCTGTGGCCGCTCGGCCGTGTCCATGACGTGCCGGTGGCGGCGCTGTTTCGCGACAACATCGCGCAGGCGCTGCGCTGGCCGCGGCGGCGCATTCTCCTGCTGATGGCCGGCGTGATCGCGCTGCTGATCGCGGTGGCCATTGGTCTGGCCTATGACAAGCGCGTCGCCGCCGTGTTCGTCGCCTCCAGCATTGTGGTGTTCGCGCTGCTGCGCGGCATCGCCTCGCTGCTGATGGCGATTGCAAGGCGCTTGCCGCGTCCGCGCTTCACCATGCTGCGGCTGGCGATCGCCAATATCCACCGGCCCGGCGCGCTGACGCCGTCCGTGGTGATGTCGCTCGGCCTCGGCCTCGCGGTGCTGGTGACCATCACCCAGATCGACGGCAACCTGCGGCGGCAGTTCATGGCGGCGCTGCCGGAACATGCGCCCTCGTTCTACTTCATCGACATTCCCGCCGCCGACGCCACGCGCTTCGGCGACTTCCTCAAACAGGAAGCACCGGGCGGCACGGTGGAAACCGTGCCGATGCTGCGCGGGCGCATCACTGCCGCGAAAGGCGTCAAGGCGGAAGACCTCAAGCCGTCGCAGGACGCCGCCTGGGTGCTGCAGAGCGACCGCGGCCTGACCTATACCGGCGAGGTGCCGCGCGGCTCGAAAGTCGTCGAAGGCACATGGTGGGGCGAAACCTATGACGGCCCGCCGCTGGTCTCGATGGAAAAGAAAATCGCCGACGGCCTCGGTCTCAGGATCGGCGACGACATCACCGTGAACGTGCTCGGCCGCGACCTCACTGCCAAAATCGCCAACCTGCGCACGGTGGACTGGCAGAGTCTGGGCATCAATTTCGTGCTGGTGTTCACGCCGAAGACCTTCGCGGGCGCGCCGCATACCGGCATCGCCACCCTCACCGAAACCGGCGCCAGCGTGGCGGGCGACGCCAAGCTGATCAAGGACGTCGCGGCGGCGTTCCCGATGGTGACCAGCGTGCGGGTGCGCGAGGCGCTGGATTCGATCGGCACCGTGGTGACCAATCTCGTGCTGGCGATCCGCGGCGCAAGTTCCGTCACGCTGATCTCGGCGCTTCTGGTGCTGGGCGGCGCGCTGGCCGCCGGTCACCGCCACCGTGTCTATGACGCCGTGATCCTGAAAACCCTCGGCGCCACCCGTGCCCGCCTGCTCGGCGCCTACGCCCTCGAATACCTGCTGATCGGCCTCGCCACCGCCGTGTTCGGGGTGGCGGCGGGATCGATCGCCGCTTGGCAGATCGTCACCCGGCTGATGACCCTGAGCTTTGTCTGGCAGGGCGGCAGCGCCGCCATTGTCGTGCTCGCCGCGCTGGCGGTGACGACCGGCCTCGGGCTCGCGGGAACATTACTTGCGCTTAACCAAAAACCGGCTAGCGTGCTGCGCGACTTATGA
PROTEIN sequence
Length: 857
MTLAAETSPRGATPSLALRYALRELRSGLRGFYVFIACIALGVMAIAGVGSVAGSLNQGLDRQGRTLLGGDASFALIQREASADERAFLDSRGKITSAALMRAMAKSPSGEFALVDLKAVDSNYPLLGRVALSPQMPMADLLAQQNGAYGAGADAVLLARLGLKLGDRVTVGATPLEIRAVVNAEPDKLAGGIGLGPRLLVSEDALRATGLLQPGTLVRWVYRVQLPDAGGEESATRALIAQSETALPHAGWEVRTRDNASPQLERNITRFSQFLTLVGLAALLVGGVGVANAIKSHLDERRDVIATFKALGATGREVFTIYLVQVLVLALLGSLIGLAIGAALPFAIAGLFGKILPLPVEPTFHIGELALSLVYGLLTALAFSLWPLGRVHDVPVAALFRDNIAQALRWPRRRILLLMAGVIALLIAVAIGLAYDKRVAAVFVASSIVVFALLRGIASLLMAIARRLPRPRFTMLRLAIANIHRPGALTPSVVMSLGLGLAVLVTITQIDGNLRRQFMAALPEHAPSFYFIDIPAADATRFGDFLKQEAPGGTVETVPMLRGRITAAKGVKAEDLKPSQDAAWVLQSDRGLTYTGEVPRGSKVVEGTWWGETYDGPPLVSMEKKIADGLGLRIGDDITVNVLGRDLTAKIANLRTVDWQSLGINFVLVFTPKTFAGAPHTGIATLTETGASVAGDAKLIKDVAAAFPMVTSVRVREALDSIGTVVTNLVLAIRGASSVTLISALLVLGGALAAGHRHRVYDAVILKTLGATRARLLGAYALEYLLIGLATAVFGVAAGSIAAWQIVTRLMTLSFVWQGGSAAIVVLAALAVTTGLGLAGTLLALNQKPASVLRDL*