ggKbase home page

SCNpilot_expt_1000_bf_scaffold_8352_curated_4

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(2690..3589)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=2 Tax=Burkholderia multivorans RepID=B9BGY9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 291.0
  • Bit_score: 300
  • Evalue 2.30e-78
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:AIO28613.1}; TaxID=983594 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia ATCC 25416.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 292.0
  • Bit_score: 305
  • Evalue 5.90e-80
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 291.0
  • Bit_score: 298
  • Evalue 2.80e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Burkholderia cepacia → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGATTGAACTACGCCAATTCAGACAGTTCATTGTCGTTGCGGAAGAACTGAGTTTCCGCCGCGCCGCGGATCGACTCAACATGGCGCAGCCGCCGCTGACCGCGACAATCAAGCGCCTCGAAGATGCCATCGGCGCCACTCTCATCGAGCGCACGAACCGGATCACCTGCCTGACGGAAGCAGGACGCGTTTTCCTCGAAGAGGCGCGAAAGACCGTCAATCAGGCCGATCACGCTGTTCTCGCCGCGCAGCGCGCCGGCGCAGGATTGACCGGCTCCCTGCGCGTGACCTTCGTTGCCAGCGGCGCACGCGAATTGCTGCCATCCATATTGCGACGCTTTCGCGAGCGCTATCCGGCCGTGAAACTCGAATTGCGCGAAGCAATGACGGCGCAGCAGATCGAGCTGTTGAACGCGCAGCAAGCCGATCTTGGCTTTGTCATTCCTCCGCTTCAGAACGCTGACGGACTGACCAGTGAGGTCGTGGCCCGCTACAGGCTTGTCGCAGCGATTCCGGAAGGACACCCCCTCGCCCGCCACGCGCAGATCAAGTTGTCGGATCTTGCCCACGATCCCTGGATTCTATTTTCCGCACGTCAGGGACCGGGCCTTCACCGCATCATCCTCGATGCATGCGCTCGGGCGGGCTTCATTCCGAATATCGGTCAGGAAGCGCCACAGATGGAGACGATCGCGAATCTCGTGGCTGGCGGAATGGGTGTCGCCCTGGTCTCGAGGGCCCTTGCGACGGGTGGCCGGAAGGGCGTTGCATTCTGCGAACTCACCGGGCCCGGGGCACCGGTCGAGTTCGAACTGGCCGTCGCCTATGCGCAATCACCACCCATTCTGGATGCGTTCATTGCCGCAACCAGAGACCAAACCGCGCTGACGACGTCTTGA
PROTEIN sequence
Length: 300
MIELRQFRQFIVVAEELSFRRAADRLNMAQPPLTATIKRLEDAIGATLIERTNRITCLTEAGRVFLEEARKTVNQADHAVLAAQRAGAGLTGSLRVTFVASGARELLPSILRRFRERYPAVKLELREAMTAQQIELLNAQQADLGFVIPPLQNADGLTSEVVARYRLVAAIPEGHPLARHAQIKLSDLAHDPWILFSARQGPGLHRIILDACARAGFIPNIGQEAPQMETIANLVAGGMGVALVSRALATGGRKGVAFCELTGPGAPVEFELAVAYAQSPPILDAFIAATRDQTALTTS*