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SCNpilot_expt_1000_bf_scaffold_8352_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8352_curated_1
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..417
DNA (417bp) protein (139aa)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Rhizobium sp. CF080 RepID=J2IXT5_9RHIZ
Amidohydrolase {ECO:0000313|EMBL:KGE02079.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
amidohydrolase 2; K07045
SCNpilot_expt_1000_bf_scaffold_8352_curated_2
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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463..1431
DNA (969bp) protein (323aa)
Putative exported protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QG18_9BRAD
Putative exported protein {ECO:0000313|EMBL:EGP09960.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8352_curated_3
Marinobacter algicola, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1657..2682
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F547_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:EDM46121.1}; TaxID=443152 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter algicola DG893.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8352_curated_4
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2690..3589)
DNA (900bp) protein (300aa)
Transcriptional regulator, LysR family n=2 Tax=Burkholderia multivorans RepID=B9BGY9_9BURK
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:AIO28613.1}; TaxID=983594 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia ATCC 25416.;"
LysR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_8352_curated_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3646..4095)
DNA (450bp) protein (150aa)
Transcriptional regulator n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RUV0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KIZ47852.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_8352_curated_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4151..5002)
DNA (852bp) protein (284aa)
transcriptional regulator n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B5C289
Uncharacterized protein {ECO:0000313|EMBL:KIZ47852.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
aminotransferase domain-containing GntR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_8352_curated_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5225..5554
DNA (330bp) protein (110aa)
NIPSNAP family containing protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B4DE1D
Uncharacterized protein {ECO:0000313|EMBL:KIZ47853.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
NIPSNAP family containing protein
SCNpilot_expt_1000_bf_scaffold_8352_curated_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5610..6137
DNA (528bp) protein (176aa)
molybdopterin dehydrogenase FAD-binding protein; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2]
molybdopterin dehydrogenase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000349AD8E
Uncharacterized protein {ECO:0000313|EMBL:KIZ47854.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
Displaying 8 items

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