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SCNpilot_expt_1000_bf_scaffold_8352_curated_6

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(4151..5002)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B5C289 similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 188.0
  • Bit_score: 261
  • Evalue 8.70e-67
Uncharacterized protein {ECO:0000313|EMBL:KIZ47852.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 260.0
  • Bit_score: 336
  • Evalue 3.90e-89
aminotransferase domain-containing GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 261.0
  • Bit_score: 213
  • Evalue 8.50e-53

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
GTGTCGCAAGACCTTCCAACTGAATGGATTCCAACTCTTCCCGAGACGCCGGGACCACGTTACCTCGCGTTCGTCCAATCGCTGGAGAGAGACATCAAGTCGGGCACCTTGAAGCCTGGCACACGCCTTCTTCCCCAGCGTGACATGGCGTCACAGCTCGGGTTGAGCGTCGGCACCATCTCCAAAGCCTATTACGAAGCGGAATCCCGCGGACTTATTTCGGGAGAAGTTGGACGCGGCACATTCGTGATGCGAAGGCGCCCGGCCGTGAGCAGCGAAAGTCCTGCTTCAACGCTCAACCTTGCGCTCAACGTACCCCCACATACCGGCGAGGATGAGCTCATCACCTCGGTCCTCAAAGACATCGTTGCGGATGGCGTGCTCCAGCCCCTGCTCGGCTACCTGCCGCATCAAGGTCTGCCTCATCACCGTGACAGCATGGTCGGATGGCTTGCGCAGCTCGGCATGTCCACCGATGCCGATCATCTCTTCATTACCCACGGCGGACAGCATGGTCTCTCGATTGCCATGGGCATGGTGACCAGCCCCAACGGCATAGTGCTGACCGAGCGCTTCACCTATTCCGGTATGATCGCGCTCTCGGCGCAGAACGGATACCGGCTGCACGGTGTGGATTGCGACAAACACGGGCTGCTGCCCGATGCGCTCGATCGCGCCTTTGGAGAAACAAAAGCCCGCACGGTCTTCTCCATGCCCACGTTGCAAACGCCAACCGGCACAACGATGCCCAACGAACGNNNNNNNNNNNNNNNNNNNNNNNGAAGACGACGCCTACGCGTTTCTGTTCCAAACGCCGCCCAAGCCGATTTCCCTGCTTCTGCCAGAGCGTAG
PROTEIN sequence
Length: 284
VSQDLPTEWIPTLPETPGPRYLAFVQSLERDIKSGTLKPGTRLLPQRDMASQLGLSVGTISKAYYEAESRGLISGEVGRGTFVMRRRPAVSSESPASTLNLALNVPPHTGEDELITSVLKDIVADGVLQPLLGYLPHQGLPHHRDSMVGWLAQLGMSTDADHLFITHGGQHGLSIAMGMVTSPNGIVLTERFTYSGMIALSAQNGYRLHGVDCDKHGLLPDALDRAFGETKARTVFSMPTLQTPTGTTMPNEXXXXXXXXXRRRLRVSVPNAAQADFPASARA*