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SCNpilot_expt_1000_bf_scaffold_1664_curated_4

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(1902..3788)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Afipia birgiae RepID=UPI000312E358 similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 628.0
  • Bit_score: 1145
  • Evalue 0.0
Uncharacterized protein {ECO:0000313|EMBL:EKS41752.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 628.0
  • Bit_score: 1140
  • Evalue 0.0
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein; K01998 branched-chain amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 629.0
  • Bit_score: 1083
  • Evalue 0.0

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1887
ATGAGCTTCTACGTTGTCCAGTTTCTGACAGGTCTTGCGAGCGCAGCGTCGCTATTCCTTGTGGCATCGGGTCTCTCGATCATCTTCGGCGTGACCCGCATCGTGAACTTCGCCCATGGTGCATTCTATATGCTGGGGGCCTATGTCGCGTTCACGCTGACGGAGCGACTGTCCGGCACTTTTGGATTCTGGGGCGGCATCGTGATCGCGGCGCTGGTCGTCGCGGTGCTCGGCGCTCTGGTCGAGATGGTTCTGCTGCGCCGGATTTATAAATCTCCCGAACTGTTCCAGTTGCTGGCGACATTCGGCCTGACCCTGATGGTCGAAGATCTCGTGGTCCTGATCTGGGGACCTGACGATCTGGTCGGCCGCCGGGCGCCGGGGTTTCGCGGCGCTGTGGATTTCTTCGGCCAGAACATTCCGTCCTACGATCTTTTCCTGATCGTGCTTGGGCCGGTGGTGCTCGGCGTATTGTGGCTGCTGTTCCGGCGCACCCGCTGGGGCGTGCTGGTTCGCGCTGCGACGCAGGACCGCGACATGGTGGCCGCGCTTGGGGTCAATCAGAAGTGGCTGTTCACCAGCGTATTCGCGGTCGGTGTGTTTCTCGCCGCGCTTGGCGGCGCGTTGCAGATCCCACGCGATGCCGTGCATAACGCCATGGACCTGCGCATCATCGTCGACGTGTTCGTGGTGGTGGTGATCGGCGGTCTCGGCAGCATCACGGGCGCATTCGTCGCGGCGGTACTGGTGTCCGAACTCAATGCGTTCGGCATCCTGATCTTTCCAAAGATTTCCATCATCCTGGTCTTCCTCGTGATGGCCGTCGTGCTGATCGTGCGGCCGTGGGGGCTGTTCGGAAAGCCGGAGACGGCGGCACGCAAGACACCGGGATTGACTATTCGCCCGTGGCGCCCACTCACGACCAATGAGCGTTTCGCGGCGCTCCCTGTCCTGATCGCGGCTGCAGCACTGCCGCTGGTCGGTGGCAATTACGCGCTCACCGTCGGCGCAGAAATCGCAATCTATGTGATCTTCGCAGCCAGTCTGCATTTCCTGATGTCTGTCGGCGGCCTCGCATCCTTTGGCCACGCGGCGTATTTCGGTCTCGGTGCTTATGGCGTGGCGTTCTTTGCCAAGGCTGCGGGACTGCCCATGATCGCGTGCCTGCTGCTCGGTCCGTTGCTCGGGCTGCTCGGTGCTGCGGTGTTCGGCTTTTTCGCGGTGCAACTGTCCGGCGTTTACTTCGCGATGCTGACGCTCGCCTTTGCGCAGATCGTGTGGTCGATCGCATTTCAGTGGGTCTCGGTTACGGGCGGTGACAACGGCATCCTCGGCGTGTGGCCCGATGCCTGGGCGGCGGGACCGTCTCAATTCTATTGGCTGTCGCTGGGCATTGCCGCGCTCGCGGTCGTCGTTCTGCGCCTCATCGTCTTCTCGCCGTTCGGTTACGCTTTGCGAGCGACGCGGGATTCAGCCTTGCGGAGCGAAGCCATCGGCATCGATGGCAAGCGGATTCAATGGACTGCCTTTGTCATCGCCGGAACGGTCGCTGGCATCGGCGGCGCATTGTTCGCTTATCTCAAGGGAAGCATATTTCCCGACAGCCTCGGCATTTCACTTTCGGTCGATGCGCTGGTGATGGTGCTGCTCGGCGGTGTCGAGACGGTGTCGGGCGCTGTGGTCGGCGCGATCGTATTCAAGGCGCTTAACATCTGGCTGGTGAGCCAGACCGACTGGTCCAAGCTCGTGCTCGGCGCGGTGATCGTGCTGATCGTCGTGGCCTTCCCGAAAGGCATCGTCGGCATGATCGAGAGTGTTCGCACGCGGCGTCAGTCATCGTCTCCCAAGCCTGCCGTTCTGGCATCACGGATCGAGAGCGCGGAATGA
PROTEIN sequence
Length: 629
MSFYVVQFLTGLASAASLFLVASGLSIIFGVTRIVNFAHGAFYMLGAYVAFTLTERLSGTFGFWGGIVIAALVVAVLGALVEMVLLRRIYKSPELFQLLATFGLTLMVEDLVVLIWGPDDLVGRRAPGFRGAVDFFGQNIPSYDLFLIVLGPVVLGVLWLLFRRTRWGVLVRAATQDRDMVAALGVNQKWLFTSVFAVGVFLAALGGALQIPRDAVHNAMDLRIIVDVFVVVVIGGLGSITGAFVAAVLVSELNAFGILIFPKISIILVFLVMAVVLIVRPWGLFGKPETAARKTPGLTIRPWRPLTTNERFAALPVLIAAAALPLVGGNYALTVGAEIAIYVIFAASLHFLMSVGGLASFGHAAYFGLGAYGVAFFAKAAGLPMIACLLLGPLLGLLGAAVFGFFAVQLSGVYFAMLTLAFAQIVWSIAFQWVSVTGGDNGILGVWPDAWAAGPSQFYWLSLGIAALAVVVLRLIVFSPFGYALRATRDSALRSEAIGIDGKRIQWTAFVIAGTVAGIGGALFAYLKGSIFPDSLGISLSVDALVMVLLGGVETVSGAVVGAIVFKALNIWLVSQTDWSKLVLGAVIVLIVVAFPKGIVGMIESVRTRRQSSSPKPAVLASRIESAE*