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SCNpilot_expt_1000_bf_scaffold_6391_curated_14

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 14094..15344

Top 3 Functional Annotations

Value Algorithm Source
hemolysin secretion protein D n=1 Tax=Afipia birgiae RepID=UPI00031B4329 similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 416.0
  • Bit_score: 662
  • Evalue 2.50e-187
HlyD family type I secretion membrane fusion protein {ECO:0000313|EMBL:EKS39418.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 416.0
  • Bit_score: 659
  • Evalue 3.80e-186
type I secretion membrane fusion protein, HlyD; K12542 membrane fusion protein LapC similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 417.0
  • Bit_score: 634
  • Evalue 1.70e-179

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1251
ATGCAGCAGTCTGATTTTGCCTTCGCAAACGACATTCGCGCGGCGGTCGAACTTCGCACGCCGCGAACGTCGCGACTTATTCTGTTCTGCATGCTGGCGATGCTGGTGGTCGGAGTGATCTGGGCCCACTTCGCGGTTCTCGATGAAGTCAAGCGCGGCAATGGCCGCGTCATCCCCACCCGGCAGATGCAGGTGGTGCAATCTCTGGAAGGCGGAATCGTCGGCGCCATCCTCGTTCAGGAAGGCGCCATCGTGAACCAGGGCGAAGTCCTCATGCGGATCGAGGACACGAAGTTCGCCGCCGACCTGGGCGAAGTGCGCGAACGGCGCGCTGCCAACGCCGCCCGCGTTGCGCGGCTGGAAGCGGAAGTCACCAAGCTCGACAAGCCGGTGTTCTCGGACGAACTGGTGGAGAAATTTCCGCAGGTGGTCGCGACCGAGCGGAACCTTTTCGCGGCTCGCGCCAGGAAGCTGGCTCAGGATATCGACGTTCTGGTCCAGGCGCAGACCCGCCTCTCCGAATCCTTGAACCTGCTGAGCCGCGAAGTGGATCTGACCCAAAGGCTGTTTGCCCAGAAGGTGGTTCCGGAAATCGAATGGCTACGTCTGCAACGTCAGGCTGCCGAGATCAAAGGGCAACTCGCTGAAACGCAATCGCGCATTGCCAACGCGAAGGCAGCCTTCCAGTCGCAGGCCGAAGAGGATCTGGCGAAGTCGCGCGGCGATCTCGCAGTGCTGGATGAAACCATCAAGTCCGCGCAGGACCGCGTGCGCAGGGCCGACTTGAAGTCTCCGGTGCATGGCATCGTCAACAAGCTGAACGTGACCACGGTCGGTGCGGTGGTGCAGCCCGGCGCGAACCTCATGGACATCGTTCCGCTGGACGATACCCTTCTTGTTGAAGGCCGGATTCGTCCGCAGGACATTGCCTTTATCCGCGCGGGACAGGAAGCCGTGGTGAAGATCACCGCCTACGACTCGTCCGTTTACGGTTCGCTGAAAGGTAAGGTCGAGCGCATCAGCGCCGACGCCATCGTCGACGACAAGCCCGACCGCGGCGGGGAGAAGGAAAGCTTCTACCGCGTGATCGTCCGCACCGACAAAAACCATCTCGGTACAGCCGAGCACTCTTTGCCGATCATTCCCGGCATGGTGACGACGGTTGAGATTCTCACCGGCGCCAAATCGGTTCTTGACTACATCGTCAAGCCGGCGCGGATGCTGAAGGACGAGGCTCTGCGCGAACGCTGA
PROTEIN sequence
Length: 417
MQQSDFAFANDIRAAVELRTPRTSRLILFCMLAMLVVGVIWAHFAVLDEVKRGNGRVIPTRQMQVVQSLEGGIVGAILVQEGAIVNQGEVLMRIEDTKFAADLGEVRERRAANAARVARLEAEVTKLDKPVFSDELVEKFPQVVATERNLFAARARKLAQDIDVLVQAQTRLSESLNLLSREVDLTQRLFAQKVVPEIEWLRLQRQAAEIKGQLAETQSRIANAKAAFQSQAEEDLAKSRGDLAVLDETIKSAQDRVRRADLKSPVHGIVNKLNVTTVGAVVQPGANLMDIVPLDDTLLVEGRIRPQDIAFIRAGQEAVVKITAYDSSVYGSLKGKVERISADAIVDDKPDRGGEKESFYRVIVRTDKNHLGTAEHSLPIIPGMVTTVEILTGAKSVLDYIVKPARMLKDEALRER*