ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1266_curated_7

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 7287..8417

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate ABC transporter n=1 Tax=Afipia birgiae RepID=UPI00030F7D0D similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 383.0
  • Bit_score: 692
  • Evalue 2.00e-196
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:EKS34791.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 383.0
  • Bit_score: 685
  • Evalue 4.50e-194
TRAP dicarboxylate transporter similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 381.0
  • Bit_score: 676
  • Evalue 6.20e-192

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1131
ATGACCAAACGACAAGACAAATCCAGCCGTCGCAACTTTCTGAAGGTTGCCGCGGCAGGCGCAGCCGCGAGCGTCGCGGCGCCGGCCGCGCTCGCGCAGAGCGGCCCGGTTGCCATGCGCTTCCAGAGCACATGGCCGTCGAAGGATATTTTCCACGAATACGCGCTCGATTACGCCAAGAAGGTCAACGACATGACCGGCGGTGATCTCAAGATCGACGTGCTGCCCGCGGGCGCGGTGGTGCCGGCGTTCCAGTTGCTGGAAGCGGTGTCGAAGGGCACGCTCGACGGCGGCCATGGCGTGCTTGCCTATCACTACGGCAAGAGCAATGCGCTGGCGCTGTGGGGATCGGGCCCGGCTTATGCGATGGACGCCAACATGCTGCTGGCCTGGCACAAGTACGGCGGCGGCAAGCAGCTTCTCGAAAAGCTCTACAAGTCGGTCGGCGCCAACGTCGTGTCGTTCCCGTATGGGCCGATGCCGTCGCAGCCGCTCGGCTGGTTCAAGAAGCCGGTGCAGAAGGTCGATGACCTCAAGGGCACCAAGTTCCGCACCGTTGGCATCTCGATCGACGTGTTCACAGGCATGGGTGCTGCGGTGAACGCGCTGCCCGGCGGCGAAATCGTTTCGGCGATGGACCGTGGCCTGCTGGACGCGGCTGAATTCAACAACGCCTCGTCGGACCGCGTGCTCGGCTTCCCGGACGTCTCGAAGGTCTGCATGCTGCAGAGCTATCACCAGAACGCCGAGCAGTTCGAGATCATGTTCAACAAGGCCAAGTACGACGCGCTGCCGCCGAAGATCCAGGCGATCCTCGACAATGCGGCCGAGGCCGCTGGACAGGACATGGCCTGGAAGGCGATCGACCGCTATTCGACCGACTACGCGGAGATGCAGAGCAAGGACAAGGTGAAGTTCTACAAGACGCCTGACTCGGTTCTGCAGAAGCAGCTCGAAATCTACGACGAGGTTGTCGCGAAGAAGTCCGCCGCCGATCCGCTGTTCAAGGAGATCGTCGAATCGCAGCTCGCCTTCGCCAAGCGCGCGACGCAGTGGGAGCAGGACACGGTCACCAACCGCCGCATGGCGTATAACCACTACTTCGGGCCGAACGCCAAGAAGAAGACCTGA
PROTEIN sequence
Length: 377
MTKRQDKSSRRNFLKVAAAGAAASVAAPAALAQSGPVAMRFQSTWPSKDIFHEYALDYAKKVNDMTGGDLKIDVLPAGAVVPAFQLLEAVSKGTLDGGHGVLAYHYGKSNALALWGSGPAYAMDANMLLAWHKYGGGKQLLEKLYKSVGANVVSFPYGPMPSQPLGWFKKPVQKVDDLKGTKFRTVGISIDVFTGMGAAVNALPGGEIVSAMDRGLLDAAEFNNASSDRVLGFPDVSKVCMLQSYHQNAEQFEIMFNKAKYDALPPKIQAILDNAAEAAGQDMAWKAIDRYSTDYAEMQSKDKVKFYKTPDSVLQKQLEIYDEVVAKKSAADPLFKEIVESQLAFAKRATQWEQDTVTNRRMAYNHYFGPNAKKKT*