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SCNpilot_expt_1000_bf_scaffold_7020_curated_14

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(11927..13543)

Top 3 Functional Annotations

Value Algorithm Source
iron ABC transporter permease n=1 Tax=Afipia birgiae RepID=UPI000315F64D similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 547.0
  • Bit_score: 842
  • Evalue 2.30e-241
Uncharacterized protein {ECO:0000313|EMBL:EKS35192.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 547.0
  • Bit_score: 841
  • Evalue 7.10e-241
binding-protein-dependent transport systems inner membrane component; K02011 iron(III) transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 537.0
  • Bit_score: 683
  • Evalue 7.20e-194

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1617
GTGACAAGCGCGCGTTTCGCCGAACCCGTTGTCTCCGCGCTCGCGTTGTTCACCGCGGCGCTTGTGGCGATGCCTGTGCTTGCGATCGCGCTGCTTGCGACACAGCCCGCGCCCGACGTGTGGCAACACCTGATCGACTATGTGCTGCCGCTCGCGCTGCGCGACACGGCGCTCCTGCTCGCGGGAGTCGGCCTTGTCGCACTTATTGCCGGGGCAGGCAGCGCATGGATCGTCTCACGGTATGATTTTGCGGGCCGCAGGATGCTGCTGTGGTTGTTGCCGCTGCCGCTTGCGATCCCGACCTACATCGCCGCCTATGTCTATGTGGACCTGTTCGAGCCGCTCGGCCTTCTCCATCGCACGCTGATGCTGTGGCTGCCGCCGCGCGACGCGCTGGCGCTGCTGCCCGGCCCGCGTTCGCTTCCCGGCGCCATCCTGATCATCGGCATGGTGCTGTATCCCTACGTCTATCTCTCGGCGCGGGCGGCGTTCCAGTTGCAAAGCGCCGACTTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGATGGCGCGTCCCGCCATTGCCATCGGCCTTGCCCTTGTCGCGCTGGAAACACTCAATGACATCGGCGCCAGCGAATATCTCGGCGTGCGCACCCTGACCCTCTCGATCTTCACCACGTGGCTCAATCGCGGCAGCCTCGCCGGCGCGGCGCAACTGTCGTGTCTGGTGCTGGCCATCGTCGCCGCGCTGATGACGCTGGAGCGCTATGGCCGCCGCAACGTGACCACGGAATTCTCGTCGGAAAATCCGCGGCCGACGGCACGCACGCCGCTGCGCGGTTTCAAGGGCCGGCTGGCCTTCGCTGCCTGCGCGCTGCCTGTGCTGTCCGGATTCGTCGTCCCGCTCCTCTTCCTCGTGCATCAGAGCATGCGACGCTCGCTGCTGACGGCGGATGCTGCGATCTGGCGCGATGCCTTCCACTCCGTGATCTTCGCCGCGCTGGCGACATGCGTGGCGCTGGTGCTTGGCTTTGCGACAATTCTCGCAATCCGCTGGCGGCCGGACCGGTGGCGATCGCTGGCGGCGAATATCGCGCAGGCCGGCTACGCATTGCCGGGCCTCGTGCTGGCGCTCGGATTGCTGGCCCCGGTGCTCGCACTCGATAACGGGATGAACGCACTCGCCTCACATCTTGGCCTGCCGCTGCCCGGCCTGGTGCTGATGGGCTCCGGCACAGCGGCTGTCACCGCCTACGTGATCCGCTTTCTCGCAGTGCCGACGGGATTCATCCGCGCCGGCTTCGAGCGCATTCCGCGGGACTATGACGACAGCGCGCGCAGTGCCGGCGCCAGCGATCTGACAGCCATGCGTCGCATTCACCTGCCGTTGCTGCGCCCGGTCCTCGTCGGCGCTGCTATTGTCGTTTTCGTCGATTGTCTGAAGGAACTGCCGGCGACGCTGCTGCTGCGGCCGCTCAATGTCGAGACGCTGGCCACATCGATTTACCAGCATGCCAGCCGCGGCAGTTTCGAGGACGGCGCGCTCGCGGCGCTTCTGATCGTGGCCGCGAGCATCGGCCCGGTGGCGTGGCTGACGCGGTTCTCCGACATGCCGCGGGGACCGGCCTAG
PROTEIN sequence
Length: 539
VTSARFAEPVVSALALFTAALVAMPVLAIALLATQPAPDVWQHLIDYVLPLALRDTALLLAGVGLVALIAGAGSAWIVSRYDFAGRRMLLWLLPLPLAIPTYIAAYVYVDLFEPLGLLHRTLMLWLPPRDALALLPGPRSLPGAILIIGMVLYPYVYLSARAAFQLQSADFXXXXXXXXXXXXMARPAIAIGLALVALETLNDIGASEYLGVRTLTLSIFTTWLNRGSLAGAAQLSCLVLAIVAALMTLERYGRRNVTTEFSSENPRPTARTPLRGFKGRLAFAACALPVLSGFVVPLLFLVHQSMRRSLLTADAAIWRDAFHSVIFAALATCVALVLGFATILAIRWRPDRWRSLAANIAQAGYALPGLVLALGLLAPVLALDNGMNALASHLGLPLPGLVLMGSGTAAVTAYVIRFLAVPTGFIRAGFERIPRDYDDSARSAGASDLTAMRRIHLPLLRPVLVGAAIVVFVDCLKELPATLLLRPLNVETLATSIYQHASRGSFEDGALAALLIVAASIGPVAWLTRFSDMPRGPA*