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SCNpilot_expt_1000_bf_scaffold_1648_curated_21

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(20230..20925)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 231.0
  • Bit_score: 420
  • Evalue 1.70e-114
rrmJ; ribosomal RNA large subunit methyltransferase J (EC:2.1.1.-); K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 224.0
  • Bit_score: 387
  • Evalue 2.70e-105
Ribosomal RNA large subunit methyltransferase E n=2 Tax=Bradyrhizobiaceae RepID=F7QLV0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 230.0
  • Bit_score: 420
  • Evalue 1.20e-114

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGGCGAAAGACACCACAGGACGGCTGCATGTCACGGTGAAGACCGGCGGCAAGCGCAAGCTGTCATCGAAGCTCTGGCTTGAGCGGCAACTCAATGATCCTTACGTCGCGCAGGCCAAGCGTGACGGCTTCCGGTCACGCGCGGCCTACAAGCTGCAGGAGATCGATGACAAGCATCGCATCCTCAAGCGGGGGCAGGTGGTGGTCGATCTCGGCGCCGCGCCCGGCGGATGGAGCCAGATCGCAGCCAAGCGCGTCGGCTCGGTGGAAGGCAAGGGCAAGGTCGTTGCCATCGATCTCCTGGAGATGCCGGAGCTTCCGGGTGTCAGCTTCGCGCGGATGGATTTTCTCGACGACAAGGCGCCAGACAGGCTCCGCGCCATGATCGGCGGCGGTGCCGATGTGGTGATGTCGGACATGGCCGCCAACACCACCGGCCATCGCAAGACGGATCAGTTGCGCATCATCGGGCTGGTGGAAAGCGCCGCCGCTTTCGCCAGCGAAATCCTCAATCCGGGCGGGACTTTTCTGGCCAAAGTGTTCCAGAGCGGCGCGGATGCAGAGCTGCTGACGCAGCTCAAGCGTGACTTCGCCACCGTGAAGCATGTGAAGCCCGCTGCGAGTCGGCAGGACTCGTCCGAGCGTTACGTACTGGCGCAGGGATTTCGCGGCACGAACGAGATGCAGCGGGACTGA
PROTEIN sequence
Length: 232
MAKDTTGRLHVTVKTGGKRKLSSKLWLERQLNDPYVAQAKRDGFRSRAAYKLQEIDDKHRILKRGQVVVDLGAAPGGWSQIAAKRVGSVEGKGKVVAIDLLEMPELPGVSFARMDFLDDKAPDRLRAMIGGGADVVMSDMAANTTGHRKTDQLRIIGLVESAAAFASEILNPGGTFLAKVFQSGADAELLTQLKRDFATVKHVKPAASRQDSSERYVLAQGFRGTNEMQRD*