name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1648_curated_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16..984)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PME1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39553.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(986..1849)
|
High-affinity branched-chain amino acid transport system permease n=2 Tax=Bradyrhizobiaceae RepID=F7QLX5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42415.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1929..2702)
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PNN2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42414.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_4
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2672..3133)
|
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QA47_9BRAD
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EIG56653.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3278..4498)
|
ABC transporter substrate-binding protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q213D8_RHOPB
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ABD88498.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_6
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4555..5277)
|
histidinol dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI0002E25BE3
Branched-chain amino acid transport ATP-binding protein {ECO:0000313|EMBL:EGP07976.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5270..6025)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PMD7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39548.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6352..6954
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAA7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39547.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6979..8301)
|
C4-dicarboxylate transport protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDA9_9BRAD
C4-dicarboxylate transport protein {ECO:0000256|HAMAP-Rule:MF_01300}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
dctA; C4-dicarboxylate transport protein; K11103 aerobic C4-dicarboxylate transport protein
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8567..8917)
|
Spx/MgsR family transcriptional regulator n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PNM8_9BRAD
Spx/MgsR family transcriptional regulator {ECO:0000313|EMBL:EKS42409.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_11
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9056..10483)
|
Chemotaxis protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D7H3_BRAJP
chemotaxis protein; K03406 methyl-accepting chemotaxis protein
Chemotaxis protein {ECO:0000313|EMBL:BAL07470.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10685..12280)
|
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PMC5_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_13
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12516..12839)
|
Sun protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
MFS transporter n=1 Tax=Afipia birgiae RepID=UPI0002D491AB
MFS transporter {ECO:0000313|EMBL:KJC55142.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_14
unknown
|
Not on your lists |
12973..13614
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13831..14166)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJ20_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39535.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_16
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14300..14824
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003002EE0
Uncharacterized protein {ECO:0000313|EMBL:EKS42395.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14936..15970)
|
2-alkenal reductase n=1 Tax=Afipia birgiae RepID=UPI0002FA057E
Uncharacterized protein {ECO:0000313|EMBL:EKS39532.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
alcohol dehydrogenase; K07119
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16113..16736)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PD95_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39531.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16933..18432)
|
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
guaB; inosine-5'-monophosphate dehydrogenase GuaB (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205]
inosine-5`-monophosphate dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI00030CB4B3
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18766..20226
|
Drug:H+ antiporter-2 (14 Spanner) (DHA2) family drug resistance MFS transporter n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFJ5_9BRAD
Drug:H+ antiporter-2 (14 Spanner) (DHA2) family drug resistance MFS transporter {ECO:0000313|EMBL:EKS39529.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
major facilitator transporter
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_21
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20230..20925)
|
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
rrmJ; ribosomal RNA large subunit methyltransferase J (EC:2.1.1.-); K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
Ribosomal RNA large subunit methyltransferase E n=2 Tax=Bradyrhizobiaceae RepID=F7QLV0_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20980..22053)
|
phosphatase, Ppx/GppA family protein; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PA87_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39527.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22273..24648
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PD91_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39526.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
carbon monoxide dehydrogenase
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24826..25956
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PC03_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38234.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_25
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26010..26306)
|
Antibiotic biosynthesis monooxygenase n=2 Tax=Bradyrhizobiaceae RepID=F7QNQ3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38681.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
antibiotic biosynthesis monooxygenase; K07145
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_26
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26418..26648)
|
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8P7Y9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP07208.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_27
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26701..27966)
|
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6N8_9BRAD
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKS38237.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ggdef domain
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_28
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28205..28681)
|
30S ribosomal protein S9 n=2 Tax=Bradyrhizobiaceae RepID=F7QNQ6_9BRAD
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_29
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28681..29118)
|
50S ribosomal protein L13 n=2 Tax=Bradyrhizobiaceae RepID=F7QNQ7_9BRAD
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13
|
|
SCNpilot_expt_1000_bf_scaffold_1648_curated_30
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29271..29699)
|
phenylacetic acid degradation protein n=1 Tax=Afipia birgiae RepID=UPI00037A9F09
Phenylacetic acid degradation-like protein {ECO:0000313|EMBL:EGP07212.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
|