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SCNpilot_expt_1000_bf_scaffold_1648_curated_27

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(26701..27966)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6N8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 417.0
  • Bit_score: 666
  • Evalue 2.30e-188
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKS38237.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 417.0
  • Bit_score: 666
  • Evalue 3.20e-188
ggdef domain similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 401.0
  • Bit_score: 566
  • Evalue 7.70e-159

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGCCGGTCACCACCCATCTCTCCCTCGATATTTCGACGCTCTATCTTGCTGCGACACTCGCAGCGGCACTGCTTGGCGCCATGCTGCTGTTCTTCTGGCGGCAGGAGCGGATCGCTGCGCTCGGCTGGTGGGGCACGGCGTATATCCTTGGCGCGGCATCCGTCGCGTTGTGGACAGCCGGTGGCGCCGGCCTGGGCTGGAAGCTGTCGCTCGCCGTGAACGTGGTTGGTTTCATCGCCTGCGGCCTGGTGTGGGACGCGGCGCGTGTCTTCCATGGACGCCGGGCGCTCTGGCTCGCTGTGCTCGCGGGGCCCTTGCTGTGGGTTGCGGCGACAATCGCGTTCCATCCGCTCAATCCGGAAGTGCAAATGCTGCTGGGTGCGGGCATCGTCGCTTTCTATGCGGCGCTGACCACGGGCGAACTGCTGCGAGAGCGCCGCAAGTCCATGCGTGCGCGATGGCCCGCCCTTGTTATTCCGGCGATGCACGGCGCGGTTCTGATGCTCCCGCTTATTCTGGGCGATATGTTCCGCTCCCGCGATGCGCAGTTGATGGAGCAGGTCTGGGTCGTGGTGTTCGCCGCGGAACTGGTTCTCTATGCCGTCGGAACGGTCTTCATCATCGTCATGCTTGTGTCGGAACGCGCGGTCAGCGTGCACAAGACCGCGGCTTCGGTCGATCCGCTGACCGGACTTCTCAATCGCCGCGGATTCAGCGAAGCGACGGCGCGGATGATTGAACGCGAAGCCAAGGCCGGCCGGCCCGTCACCGTGCTGATCTTCGACATCGATCATTTCAAGTCGGTCAACGACCGTTTCGGCCACGCCGCGGGTGACGATGTGCTCAAGGTTTTCGCCGATGTCGTCGTCGGCTCGTTGCGCATCACGGACCTTGTCGGCCGGGTGGGCGGCGAGGAATTCGCGGCCCTTCTGCCCTGTTCGGTGGAGGAGGCTGTTCTGGTCGCCGAACGCGTCCGTGAGGCGTTCGAGGCGTCGGGCGTTGCCATCGACGATGCGCCATTGGAAACCACCGTCAGCATCGGTGTGTCCGGCGGACCGGCGAACACCGAACTCGAGGTGCTGATGGCGTCGGCCGATACCGCACTCTATCAGGCCAAGCGTGGCGGTCGAAACCGCGTGGAGGTTGCCGTGGAGCAGCCGCTGTCGCTGGAAAGCTCCCGGCGCAAACTCGCGAAAGTCGCGCCGCAGCCGGATGCGGAGAAGCGCGAGCCTGAGGGCGAGCCGGCGATGGAAGTCGCCGTCTGA
PROTEIN sequence
Length: 422
MPVTTHLSLDISTLYLAATLAAALLGAMLLFFWRQERIAALGWWGTAYILGAASVALWTAGGAGLGWKLSLAVNVVGFIACGLVWDAARVFHGRRALWLAVLAGPLLWVAATIAFHPLNPEVQMLLGAGIVAFYAALTTGELLRERRKSMRARWPALVIPAMHGAVLMLPLILGDMFRSRDAQLMEQVWVVVFAAELVLYAVGTVFIIVMLVSERAVSVHKTAASVDPLTGLLNRRGFSEATARMIEREAKAGRPVTVLIFDIDHFKSVNDRFGHAAGDDVLKVFADVVVGSLRITDLVGRVGGEEFAALLPCSVEEAVLVAERVREAFEASGVAIDDAPLETTVSIGVSGGPANTELEVLMASADTALYQAKRGGRNRVEVAVEQPLSLESSRRKLAKVAPQPDAEKREPEGEPAMEVAV*