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SCNpilot_expt_1000_bf_scaffold_454_curated_18

Organism: scnpilot_dereplicated_Afipia_1

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 22532..24607

Top 3 Functional Annotations

Value Algorithm Source
Selenocysteine-specific elongation factor SelB n=2 Tax=Oligotropha carboxidovorans RepID=B6JC82_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 691.0
  • Bit_score: 1054
  • Evalue 0.0
selB2; selenocysteine-specific elongation factor SelB; K03833 selenocysteine-specific elongation factor similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 691.0
  • Bit_score: 1054
  • Evalue 0.0
Selenocysteine-specific elongation factor SelB {ECO:0000313|EMBL:AEI07496.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 691.0
  • Bit_score: 1054
  • Evalue 0.0

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2076
ATGATTGTCGGGACCGCCGGACATATCGATCACGGCAAGACCTCGCTGGTGCGGGCGCTGACCGGTGTCGATACCGATCGGTTCAAGGAGGAGAAGGCACGAGGCATCTCGGTCGATCTCGGCTTCGCCTATCTGCCGACGCCCGATGGCGGCATTCTCGGCTTCATCGACGTGCCGGGTCACGAGCGTTTCGTGCACAACATGCTTGCAGGCGCGACCGGCATCGATTTCGTGTTGCTGGTGGTGGCCGCCGACGACGGCGTGATGCCGCAGACCATCGAGCATCTGGCAATCATCAATCTGCTTGGCATCAGCCATGGCGTGGTGGCGATCACCAAGGCGGATCTGGTCGATACCGATCGTCTTGCCGAGGTGCGGAGCGAAATCGCCAATGTGCTGGCGCCGACGGGCCTCGCCGATGCGCAGATGCTGGCCGTCTCCAGCCAGACCGGGCAGGGCATTTCCGAGCTCCGCGACAGGCTGTTTGCCGAGTCCAGGGCACAACAGAGCCGGTCGGCCAAGGGACGTTTCCGCCTGGCGGTGGATCGCTCCTTCACTCTGGCGGGCGCAGGCACGGTGGTGACCGGGACGGTGCTGTCGGGCAGCGTCGCTGTCGGCGATCAGGTGATGATCAGCCCATCGGGGAAAACGGCGCGCGTGCGCGCGATCCATGCACAGAATCAGCCTGCGCAGACCGGGCGCGCGGGCGACCGCTGCGCGCTCAATCTGGTCGGCGATTCCATCAGCAAGGATGCGATCGCGCGCGGCGATGTCGTGCTTGATCCCGAACTGCACGCACCGGCCGATCGCATCGATGCGATCGTGCGTGTCCTTGCCTCGGAAACGAAGCCGCTCACACAGTGGATGCCGGTTCGTCTGCATCATGCCGCGACGGAGGTTGGCGCGCGCGTGGTGTTGCTCGGCGACGAGCCGGTTCCGCCGGGCGGCGAGGCCTTTGTCCAGCTCGTGCTGGAACGGCCGGTGGCGGTCGCGACCGGTGACCGTTTCGTGCTGCGCGACACCACGGCGCAACGAACCATCGGCGGCGGATCGTTCATCGATCTGCGGGCGCCGGCCCGCAAGCGGCGCACGCAGGAGCGCGTGGCGCAGCTTGAGGCGCTGGCGATTCCGGATACGGAAAAAGCGCTCGCGGCTCTGATCGACCGCGCGCCGGGTTATCTCGATTTTTCCGCCTTTGTTCGCGATCATGCCGTCTCGGCCACGGAGCGCGATGCGATGATTGCGCGGATGAGTCTGCTGAGGCTGCCGACCGCGAAGACCGAATATGTGATCTCGCCGGTGGGCTGGCTGCGGCTCAAGAACGACATTCTGGCCGTGCTGAAGAAATTCCATGCCGACAATCCCAATCTTGCCGGCATCGGCCTTGAGCGGCTCCGTCTACAACTCGAGCCGCGCCTGCCGGCGCCGGCCTTCGTGGCGCTGCTACATGGACTGGTGCGCACCAAGGATATCACGCTCGACGGCTCCTGGATCCGTCTGCCGGGGCACGAGGTCCATCTTACGCCCCAGGACGAGGCGATGTGGACCAAGATCAAGCCTTACATCGTGGATGCCGCGCGCTTCCGGCCGCCGCGGGTGCGGGACATCGCCGGCTACATCTGCGTGCCGGAGCAGGAGGTGCGCCGGCTGCTCAAATTGCTCGGCCGGATGGGGCGGGTCGATGAGGTCGCGCACGACCATTTCTTCCTGCGCGAGACCGTCGCCGAGATGGTCGTGATCATGACCGATCTGGCGGCGACGATCCCTGACGGCCAGTTCACCGCCGCGCAATTCCGCGACTGCCTCGACAATGGCCGGAAAGTCGCGATTCAGATTCTTGAGTTTTTTGACCGTCACGGTGTTACAATTCGTCGCGGCGATCTGCGACGGATCAACAAACATCGGCTTGACCTATTTCGCGGGCCAGCCGATGTATTGAAGGCGCCGAGCACGGTTCCGATATTGGAAACCAAAGGAAGAGCATCGTTCCCGGTGGGGCGTCCGGACTTCAAATCCGGGAAGGACCGCGAGTCGGTTCTTGGTGGGTTCGACTCCCATTCTCTTCCGCCACGGTAA
PROTEIN sequence
Length: 692
MIVGTAGHIDHGKTSLVRALTGVDTDRFKEEKARGISVDLGFAYLPTPDGGILGFIDVPGHERFVHNMLAGATGIDFVLLVVAADDGVMPQTIEHLAIINLLGISHGVVAITKADLVDTDRLAEVRSEIANVLAPTGLADAQMLAVSSQTGQGISELRDRLFAESRAQQSRSAKGRFRLAVDRSFTLAGAGTVVTGTVLSGSVAVGDQVMISPSGKTARVRAIHAQNQPAQTGRAGDRCALNLVGDSISKDAIARGDVVLDPELHAPADRIDAIVRVLASETKPLTQWMPVRLHHAATEVGARVVLLGDEPVPPGGEAFVQLVLERPVAVATGDRFVLRDTTAQRTIGGGSFIDLRAPARKRRTQERVAQLEALAIPDTEKALAALIDRAPGYLDFSAFVRDHAVSATERDAMIARMSLLRLPTAKTEYVISPVGWLRLKNDILAVLKKFHADNPNLAGIGLERLRLQLEPRLPAPAFVALLHGLVRTKDITLDGSWIRLPGHEVHLTPQDEAMWTKIKPYIVDAARFRPPRVRDIAGYICVPEQEVRRLLKLLGRMGRVDEVAHDHFFLRETVAEMVVIMTDLAATIPDGQFTAAQFRDCLDNGRKVAIQILEFFDRHGVTIRRGDLRRINKHRLDLFRGPADVLKAPSTVPILETKGRASFPVGRPDFKSGKDRESVLGGFDSHSLPPR*