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SCNpilot_expt_1000_bf_scaffold_454_curated_23

Organism: scnpilot_dereplicated_Afipia_1

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(27237..28580)

Top 3 Functional Annotations

Value Algorithm Source
gdh; NADP-specific glutamate dehydrogenase Gdh (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 447.0
  • Bit_score: 803
  • Evalue 3.00e-230
glutamate dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI0002DE7498 similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 447.0
  • Bit_score: 827
  • Evalue 4.80e-237
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 447.0
  • Bit_score: 811
  • Evalue 5.00e-232

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1344
ATGCTCGACGAAAAGCTTCAACCCATCTTCGACGACGTCCTGCGCCGCAATCCCGGCGAGGACGAGTTTCACCAGGCCGTTCGCGAAGTGCTCGACAGCCTCGGCGCCGTTGTGGCCAAACATCCGCATTATGCCGAAGACGCCCTGATCGAACGGATCTGCGAGCCGGAGCGGCAGATCATCTTCCGCGTGCCGTGGGTCGACGACAAAGGCCATGTGCAGATCAACCGAGGCTTCCGCGTCCAGTTCAATTCCGCGCTCGGCCCGTTCAAGGGCGGCCTGCGTTTCCATCCGACCGTCTATCTCGGCACCATCAAGTTTCTCGGCTTCGAACAGACCTTCAAGAATGCCCTCACCGGCATGCCGATCGGCGGCGGCAAGGGCGGCGCCGATTTCGATCCGAAGGGCCGCTCGCCCGGCGAGATCATGCGGTTCTGCCAGTCGTTCATGACAGAACTGTCCCGCCACCTCGGCGAGTACACCGATGTGCCGGCAGGCGACATCGGTGTCGGTCAGCGCGAGATCGGCTTCATGTTCGGCCAGTACAAGCGCATCGCCAATCGCTACGAATCCGGCGTGCTCACCGGCAAGGGCCTGGCATGGGGCGGATCGCAGGTCCGCACCGAAGCCACCGGCTATGGCGCGGTGTATTTCGTCGAGCGCATGCTTCGTACACGCAATCACAACTTCGACGGCAAGAAGGTGATCGTGTCCGGCTCCGGTAACGTTGCCATCTACACCATGGAAAAGATCATGGAGCTCGGTGGCAAGGTCATCGCGTGCTCGGACTCCAATGGCTATGTCGTGGAAGAAGCCGGTATCGATCTCGCCTTGCTCAAGGAGATCAAGGAAAAGAAGCGCGGCCGCGTTTCCGACTATGCCAAGGCCCGGCGCTCGGGAGCGACCTACGTCTCGAACGGCCGCATCTGGGATGTGCCGGCCGATGTGGCGATGCCCTCCGCAACCCAGAACGAGCTGAACGGTCAGGATGCGCGCACGCTGGTGAAGAACCGCGTAGTGGCGGTCGGCGAAGGCGCCAACATGCCGTGCACGCCCGAGGCCGTGAAGACGTTCCTCGATGCGGGCGTGATGTTCGGCCCCGGCAAGGCGACCAATGCCGGTGGCGTCGCCACCAGCGCGCTCGAAATGCAGCAGAACGCTTCGCGCGACTCTTGGTCGTTCGAAGCAACCGAGGCGCGTCTTGCCACCATCATGCACGGCATTCACGACCGCTGCGCCGAGATGGCTGACACCTACGGCTCGCCGGGCAACTACGTGCTTGGCGCCAACGTCGCCGGCTTTATCCGCGTGGCCGAAGCCATGCGCGCGCTTGGCATCGTCTAA
PROTEIN sequence
Length: 448
MLDEKLQPIFDDVLRRNPGEDEFHQAVREVLDSLGAVVAKHPHYAEDALIERICEPERQIIFRVPWVDDKGHVQINRGFRVQFNSALGPFKGGLRFHPTVYLGTIKFLGFEQTFKNALTGMPIGGGKGGADFDPKGRSPGEIMRFCQSFMTELSRHLGEYTDVPAGDIGVGQREIGFMFGQYKRIANRYESGVLTGKGLAWGGSQVRTEATGYGAVYFVERMLRTRNHNFDGKKVIVSGSGNVAIYTMEKIMELGGKVIACSDSNGYVVEEAGIDLALLKEIKEKKRGRVSDYAKARRSGATYVSNGRIWDVPADVAMPSATQNELNGQDARTLVKNRVVAVGEGANMPCTPEAVKTFLDAGVMFGPGKATNAGGVATSALEMQQNASRDSWSFEATEARLATIMHGIHDRCAEMADTYGSPGNYVLGANVAGFIRVAEAMRALGIV*