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SCNpilot_expt_1000_bf_scaffold_823_curated_15

Organism: scnpilot_dereplicated_Afipia_1

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 14272..14991

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RadC n=2 Tax=Afipia RepID=K8NWU8_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 239.0
  • Bit_score: 430
  • Evalue 1.20e-117
DNA repair protein RadC {ECO:0000313|EMBL:EKS30678.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 239.0
  • Bit_score: 430
  • Evalue 1.70e-117
radC; DNA repair protein RadC; K03630 DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 239.0
  • Bit_score: 415
  • Evalue 1.60e-113

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGTCCGCAACCAGCGATGACTCATCCGAACCCTCCGGCTTTGCCGAGGCTCCGCATTATCACGGCCATCGCGAGCGGCTGCGCGACCGCTTCAAGGAAGCCGGTCCCGACGCGCTGAGCGATTACGAACTGCTGGAAATGGTGTTGTTCCGCGCGCTGCCGCGCCGCGATGTCAAGCCGCTGGCAAAGGCTCTGATCGCGCGGTTCGGTTCGTTCGCCGAAGTGGTGCACGCGCCGGAAGCGCGATTGCGCGAAATCAGCGGCATCGGCGACGCCGCGGTCACCGAAGTCAAGCTGATCGCGGCGACCGCGAGCCGCGTCATCAAGGGCCAGATGACGCAGCGCCCCGTGCTGTCGTCATGGTCGAGCGTGATCGACTATTGCCGCGCGGCGATGGCGTTCGCCGACAAGGAACAGTTCCGCATCCTGTTTCTCGACAAGCGCAACCAACTCATCGCCGACGAGGTGCAGCAGGTCGGCACCGTAGACCACACCCCGGTCTATCCGCGCGAGGTGGTCAAGCGCGCGCTGGAACTGTCCGCCACCGCGATTATTTTGGTGCACAACCATCCTTCCGGCGATCCGACACCGTCCACCGCCGACATCCAGATGACCAAATCGATTATCGCGATCTCCAACCCGCTCGGCATCTCCGTGCATGACCACATCATCGTCGGCAAGAACGGCCATGCCAGCCTGAAAGGCATGAAGCTGATGTAG
PROTEIN sequence
Length: 240
MSATSDDSSEPSGFAEAPHYHGHRERLRDRFKEAGPDALSDYELLEMVLFRALPRRDVKPLAKALIARFGSFAEVVHAPEARLREISGIGDAAVTEVKLIAATASRVIKGQMTQRPVLSSWSSVIDYCRAAMAFADKEQFRILFLDKRNQLIADEVQQVGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSTADIQMTKSIIAISNPLGISVHDHIIVGKNGHASLKGMKLM*