ggKbase home page

SCNpilot_expt_300_bf_scaffold_431_curated_20

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(17581..18834)

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC transporter, branched-chain amino acid-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XNB6_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 417.0
  • Bit_score: 732
  • Evalue 2.60e-208
putative ABC transporter, branched-chain amino acid-binding protein similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 417.0
  • Bit_score: 732
  • Evalue 8.00e-209
Putative ABC transporter, branched-chain amino acid-binding protein {ECO:0000313|EMBL:AGU53600.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 417.0
  • Bit_score: 732
  • Evalue 3.60e-208

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1254
ATGAGCATGAATCGCAGACAGTTTTCGCAGGCGGTCGCCGCATTGGCGGCCACATCGGCAACGCCCCTGCTGTGGGCCGCCCAGGCCATCAAGATAGGCTATGTGTCGCCGCAGACCGGACCGCTGGCGCCGTTCGGCGAAGCCGACAAATGGGTGATCGACCAGATGAAGGCCGCGTTCAAGGACGGCATCGTCGGCGGCGGTACCCGGCATGCCGTGGAGATCGTGCTCAAGGACAGTCAGTCCAACCCCAACCGGGCGGGCGAGGTGGCGAATGACCTCATCCTCAAGGAAAAGGTGGCGCTCATGCTCACGGCGGGTACGCCGGAAACCGCGAACCCCGTCAGCGATGCCTGCGAGCTCAACGAAGTGCCCTGCGTGTCCAGCGTCGTGCCATGGCAGCCCTGGTTCTTTGGCCGCAATGGCGATCCCCGACAGGGCTTCGACTGGACCTACCACCTCTTCTGGGGGCTGGAGGACGTGATCGCGGCCTATACCAATGGCTGGAAGGGCCTGCAGACCAACAAGAAGGTCGGAGGCCTGTTCCCCAACGACGGTGACGGCAATGCCTGGGGCGACAAGAAGCTGGGTTTTCCAAAACCGCTGGCGGACATGGGCTTGTCGCTGACCGACCCGGGCCGTTTCCAGAGCGGCACGCAGGACTTTTCGGCCCAGATCGCGGCCTTCAAACGCGACAACGTGGAAATCGTCACCGGCGTGGTGATTCCGCCCGATGCCAAGACTTTCCTGACCCAGGCACGCCAGCAGGGCTTCAAGCCCAAGGCCGTCACGCTGGGCAAGGCGCTGCTGTTCCCGAGCGCGCTCGAGGCGCTCGGCGATCTGGGCCTGGGCCTGAGCACCGAGGTGTGGTGGTCGCCATCGCATCCGTTCACCTCGTCGCTGACCAGGCAATCGGCGCAGGCGCTGGCCGACAGCTACGAAGCCGGCACGCGCAAGCAGTGGACCCAACCCATCGGCTTTGCACATGCGCTGTTCGAGGTGGCAGCCAACGCGCTGGCGCGCAGCAAGTCGCTGAAAGCCGAAGACGTGCGCAATGCCGTGGCGTCCACCTCGATCGACTCCATCGTCGGCCCGGTGAAATGGGGCGGGCCGGGCCCCATGAAGAACGTGAGCCGGACGCCGCTGGTGCTCGGCCAGTGGCGCAAGGGCCATCAACGCAAGGTGGAGCTGGTGATCGTGAACAACGGCGCCGCAACCAACATTCCCGCCGGCGGCGCCATGCAGCTGCTGTGA
PROTEIN sequence
Length: 418
MSMNRRQFSQAVAALAATSATPLLWAAQAIKIGYVSPQTGPLAPFGEADKWVIDQMKAAFKDGIVGGGTRHAVEIVLKDSQSNPNRAGEVANDLILKEKVALMLTAGTPETANPVSDACELNEVPCVSSVVPWQPWFFGRNGDPRQGFDWTYHLFWGLEDVIAAYTNGWKGLQTNKKVGGLFPNDGDGNAWGDKKLGFPKPLADMGLSLTDPGRFQSGTQDFSAQIAAFKRDNVEIVTGVVIPPDAKTFLTQARQQGFKPKAVTLGKALLFPSALEALGDLGLGLSTEVWWSPSHPFTSSLTRQSAQALADSYEAGTRKQWTQPIGFAHALFEVAANALARSKSLKAEDVRNAVASTSIDSIVGPVKWGGPGPMKNVSRTPLVLGQWRKGHQRKVELVIVNNGAATNIPAGGAMQLL*