ggKbase home page

SCNpilot_cont_300_bf_scaffold_6496_curated_16

Organism: scnpilot_dereplicated_Alphaproteobacteria_6

near complete RP 45 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: comp(16447..17124)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRN4_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 225.0
  • Bit_score: 339
  • Evalue 3.40e-90
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 225.0
  • Bit_score: 339
  • Evalue 1.10e-90
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABS62567.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 225.0
  • Bit_score: 339
  • Evalue 4.80e-90

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGCGCATACTTGTCGTTGAAGATGATCTGGAAGCACAGCGTTATCTCGTCAATGGCCTGAAGGAAGCGGGCCATGTGGTGGATGATGCCGCCGATGGCGATGTCGGACTGACGCTTGCGCTCTCGCGTCCCTACGATGTCGCGATTATCGACCGCATGCTGCCCAAGATGGACGGCCTGCATGTGGTGGGCGAGATGCGCGAGCACGGTAACGCCGTTCCGGTCCTCTTCCTCAGCGCGCTGTCCGAGGTGGATGACCGCGTCAAGGGGTTGAAGGCAGGCGGCGATGATTATCTGACCAAGCCCTATGCCTTCGTCGAATTGCTGGCGCGGATCGATGCGCTGATGCGCCGGCGCAGCCCCGCCTCGGTCCGCACCCGGCTTCAGGTTGGCGATCTGGAGCTTGATCTGCTGACGCGGGCCGCCACGCGCGCCGACCAGACAATTGACCTTCAGCCGCGTGAATTCCGGCTGCTGGAATATCTCATGCGCCACGCCGGCCAGGTGGTCACCCGTACCATGCTGCTTGAAAGCGTGTGGGAATATCACTTCGATCCGCAGACCAACGTGATCGACGTGCATATTTCCCGGCTGCGTGCCAAGATCGACAAGGGTTTTGAGACGCCGTTGCTGCATACGGTGCGCGGCGCAGGCTACATGATCCGTGCACGCAACTAG
PROTEIN sequence
Length: 226
MRILVVEDDLEAQRYLVNGLKEAGHVVDDAADGDVGLTLALSRPYDVAIIDRMLPKMDGLHVVGEMREHGNAVPVLFLSALSEVDDRVKGLKAGGDDYLTKPYAFVELLARIDALMRRRSPASVRTRLQVGDLELDLLTRAATRADQTIDLQPREFRLLEYLMRHAGQVVTRTMLLESVWEYHFDPQTNVIDVHISRLRAKIDKGFETPLLHTVRGAGYMIRARN*