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SCNpilot_expt_1000_bf_scaffold_21009_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_21009_curated_1
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..269)
DNA (267bp) protein (89aa)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
Homoserine O-acetyltransferase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RKH7_9RHOB
putative homoserine O-acetyltransferase
SCNpilot_expt_1000_bf_scaffold_21009_curated_2
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(309..791)
DNA (483bp) protein (161aa)
3-dehydroquinate dehydratase; K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10]
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
3-dehydroquinate dehydratase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G7W8_9BRAD
SCNpilot_expt_1000_bf_scaffold_21009_curated_3
unknown

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comp(893..1399)
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_21009_curated_4
unknown

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1957..2466
DNA (510bp) protein (170aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_21009_curated_5
Raoultella ornithinolytica, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2886..3218
DNA (333bp) protein (111aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|SAAS:SAAS00064334};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=54291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella ornithinolytica (Klebsiella ornithinolytica).;"
catalase/peroxidase HPI; K03782 catalase-peroxidase [EC:1.11.1.21]
Catalase-peroxidase n=1 Tax=Ralstonia pickettii (strain 12J) RepID=KATG_RALPJ
SCNpilot_expt_1000_bf_scaffold_21009_curated_6
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3343..3948
DNA (606bp) protein (202aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
Catalase/hydroperoxidase HPI(I) n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SHH6_9RHIZ
katG; heme catalase/peroxidase HPI
SCNpilot_expt_1000_bf_scaffold_21009_curated_7
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3942..5039
DNA (1098bp) protein (366aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
heme catalase; K03782 catalase-peroxidase [EC:1.11.1.21]
Catalase/hydroperoxidase HPI(I) n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SHH6_9RHIZ
Displaying 7 items

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