ggKbase home page

SCNpilot_expt_1000_bf_scaffold_8864_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(4220..4825)

Top 3 Functional Annotations

Value Algorithm Source
Photosystem reaction center subunit H n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SCL8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 37.7
  • Coverage: 199.0
  • Bit_score: 137
  • Evalue 1.80e-29
Photosystem reaction center subunit H {ECO:0000313|EMBL:AHB48641.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.7
  • Coverage: 199.0
  • Bit_score: 137
  • Evalue 2.50e-29
PRC-barrel domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 158.0
  • Bit_score: 122
  • Evalue 1.80e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGCGACGCCTCTCCCTTGCTCTTGTTGCAGCTTCCGTCATCGCGGCCGGTGCGCCGGCCATTGCCCAGCAGCAGAGCCCGGCTCCTGCGACCGCGCCTCAGACTGAAGTGTCGATCCCCCGCGGCGTATTTTTCCGCGGTCAGGTCGATGGGCAAATCCTCTCGAGCGACAACCTGATCGGCGGAAAGATTTATGCGCCCGACGGCAAGATCATTGCCGACATCGAGGAGCTGATCCTGACGTCCGATCTCCGCGTCGAAGGTGTAGTCGTCAAGACGGGTGGCTTCCTCGGCGCGGGCCAGAAGCGGCTCGGCCTGCGCTTCTCCGCGCTTCGCTTTGGTCCCGACGGCAAGATCACGGTGCCGGAGCTGACCAAGGAAGTGATCACGGCGCTCCCGGCCTATGAGCGCAAGACGCCGCGCAAGACTTTGCTCGAGCGGGCGGCCGAGAACGCGCGCTCGATCGCCGATCGCAGCATGGAGACTGCGAAGCCGGCCATCGATCAGGCCTCCGAGGCGGCGAAGGACGCCTATGAGAAGGCCAAGGAAGCCACCAAGGAAGCTTACGATAAGGCCAAGGAATCCGTGCAGCAGCCGAAGCAGTAA
PROTEIN sequence
Length: 202
MRRLSLALVAASVIAAGAPAIAQQQSPAPATAPQTEVSIPRGVFFRGQVDGQILSSDNLIGGKIYAPDGKIIADIEELILTSDLRVEGVVVKTGGFLGAGQKRLGLRFSALRFGPDGKITVPELTKEVITALPAYERKTPRKTLLERAAENARSIADRSMETAKPAIDQASEAAKDAYEKAKEATKEAYDKAKESVQQPKQ*