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SCNpilot_expt_1000_bf_scaffold_8864_curated

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8864_curated_1
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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648..869
DNA (222bp) protein (74aa)
Pirin n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SD27_9RHIZ
Pirin {ECO:0000313|EMBL:AHB48786.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
pirin; K06911
SCNpilot_expt_1000_bf_scaffold_8864_curated_2
unknown

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comp(1118..2533)
DNA (1416bp) protein (472aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B7N4_9RHIZ
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:CPR20358.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
ErfK/YbiS/YcfS/YnhG family protein
SCNpilot_expt_1000_bf_scaffold_8864_curated_3
unknown

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comp(2962..3348)
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8864_curated_4
unknown

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comp(3469..3795)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8864_curated_5
unknown

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3864..4130
DNA (267bp) protein (89aa)
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:CPR21401.1}; EC=2.3.1.16 {ECO:0000313|EMBL:CPR21401.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
acetyl-CoA acetyltransferase (EC:2.3.1.16); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SG17_9RHIZ
SCNpilot_expt_1000_bf_scaffold_8864_curated_6
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4220..4825)
DNA (606bp) protein (202aa)
Photosystem reaction center subunit H n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SCL8_9RHIZ
Photosystem reaction center subunit H {ECO:0000313|EMBL:AHB48641.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
PRC-barrel domain-containing protein
SCNpilot_expt_1000_bf_scaffold_8864_curated_7
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5034..5507)
DNA (474bp) protein (158aa)
thiol peroxidase peroxiredoxin; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Putative thiol peroxidase, putative peroxiredoxin n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGL2_HYPSM
Bacterioferritin {ECO:0000313|EMBL:EXL09087.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
Displaying 7 items

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