ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1547_curated_16

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 15025..15813

Top 3 Functional Annotations

Value Algorithm Source
FMN-dependent alpha-hydroxy acid dehydrogenase; K00104 glycolate oxidase [EC:1.1.3.15] similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 263.0
  • Bit_score: 311
  • Evalue 2.80e-82
FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XQF6_PSEMY similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 263.0
  • Bit_score: 311
  • Evalue 8.80e-82
FMN-dependent alpha-hydroxy acid dehydrogenase {ECO:0000313|EMBL:ABP83572.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 263.0
  • Bit_score: 311
  • Evalue 1.20e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas mendocina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGGCCGCGGCCGCACAGGGCGCCGGCATGGTGCTCAGCACGCTTGCCACGACCAGCATGGAGCAGGCAGCCGCAGCGGGCGAGACGTGCCGCTGGTTCCAGCTCTACATCCAGTCGGATCGCGAGGACACGCTGCGGCTCGTGCGGCGTGCGGAGGCTGCGGGCTACGAGGTGCTGGTCGTCACGGTCGACGCACCGGTGAGCGGCGTGCGCAATCGCGAGCAGCGCGCAGGCTTCCGCCTGCCTCCTCAGCTCGTTCCCGAGAATCTCCGCGGCCTCGCAGAGCCGCATCCTTCACCGAAACCGAATCTGGACAGCATCGTCTTCGAGCACTTCATGGCGATGGCACCGAGCTGGCGCGATATTGCGTGGCTGCGCGGCGTGACGCCCCTTCCGATCGTCCTCAAGGGCATCATGGCAGCTGACGATGCGGCGCGCGCGCTCGATATCGGCGTCGACGGGATCGCGGTCTCGAATCACGGCGGACGCACGCTGGACACAATACCGGCGACCATCGACGTCCTGCCCGAGATCGCCGCGCATGTTGCAGGCCGCGCGCCGCTCATCCTCGATGGCGGCATCCGGCGCGGCACTGATGTGCTCAAGGCTTTGGCGTCTGGCGCTGCGGCCGTGATGATCGGCCGCCCGATCGTGTATGGGCTCGCCGTCAACGGTGCGATGGGTGTCGCGCACGTGCTGAGGCTCCTGCGTGACGAGTTCGAGGCCGCCATGGCGCTGACAGGATGCGCATCGGTTGCCGACATCGGCCCGCATCTCTTGCGCCGCTGA
PROTEIN sequence
Length: 263
MAAAAQGAGMVLSTLATTSMEQAAAAGETCRWFQLYIQSDREDTLRLVRRAEAAGYEVLVVTVDAPVSGVRNREQRAGFRLPPQLVPENLRGLAEPHPSPKPNLDSIVFEHFMAMAPSWRDIAWLRGVTPLPIVLKGIMAADDAARALDIGVDGIAVSNHGGRTLDTIPATIDVLPEIAAHVAGRAPLILDGGIRRGTDVLKALASGAAAVMIGRPIVYGLAVNGAMGVAHVLRLLRDEFEAAMALTGCASVADIGPHLLRR*