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SCNpilot_expt_1000_bf_scaffold_3868_curated_15

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(13918..14670)

Top 3 Functional Annotations

Value Algorithm Source
tpiA; Triosephosphate isomerase 1; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 252.0
  • Bit_score: 360
  • Evalue 5.00e-97
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 252.0
  • Bit_score: 360
  • Evalue 2.20e-96
triosephosphate isomerase n=1 Tax=Pannonibacter phragmitetus RepID=UPI000372D504 similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 250.0
  • Bit_score: 364
  • Evalue 6.40e-98

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Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGACGGACAGCGCGATCAGGCCCCTCGTGGCCGGCAACTGGAAAATGAACGGCCTTACCGTATCGCTGGCCGAGGCGGAGGCCATGGCGAGGGGCCTCTCCTCCCAGGCGGCGGACGTGCTGATCTGCCCGCCGGCGACGCTCGTCGCGACGCTCGCCGCACGGCTCGGGGGATCGCGGATCGCGGTCGGCGGCCAGGATTGCCATCCCAAGGCGAGCGGCGCCCATACCGGCGACATCTCCGCGGAAATGCTCAAGGATGCCGGCGCTTCCGCCGTCATCGTCGGCCACTCCGAGCGGCGCACCGACCATCTCGAGAGCGACGCTCTCGTGAGGTGCAAGGCCGAGGCCGCGCACCGCGCCGGCCTCTCGGCAATCGTCTGCGTGGGTGAGACCGCGGCCGAGCGCCAGGCCGGACAGACGCTGGAGGTGGTCTCGCGCCAGCTCGCAGGCTCGCTGCCCGAGGCGTGCCGCGCCGCTGACACGATCGTCGCCTACGAGCCCGTATGGGCCATCGGCACGGGCCTGACGCCGACGACTGGAGATGTGGCCGAGGTACACGCCTTGATCAGAAAAGCGCTGGCAGCGCGCTTCGGCAACGAAGGGCAGGCCATGCGCATTCTGTATGGTGGCTCGGTGAAGCCATCGAACGCGAATGAGCTGATGGCGGTCGCCAACGTGAACGGGGCCCTCGTCGGCGGGGCCAGCCTCAAGGCCGCGGACTTCCTGGGGATCATCGCAGCCTATGCATAG
PROTEIN sequence
Length: 251
MTDSAIRPLVAGNWKMNGLTVSLAEAEAMARGLSSQAADVLICPPATLVATLAARLGGSRIAVGGQDCHPKASGAHTGDISAEMLKDAGASAVIVGHSERRTDHLESDALVRCKAEAAHRAGLSAIVCVGETAAERQAGQTLEVVSRQLAGSLPEACRAADTIVAYEPVWAIGTGLTPTTGDVAEVHALIRKALAARFGNEGQAMRILYGGSVKPSNANELMAVANVNGALVGGASLKAADFLGIIAAYA*