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SCNpilot_expt_1000_bf_scaffold_2708_curated_15

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 11036..12439

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterised protein {ECO:0000313|EMBL:CRE09403.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 404.0
  • Bit_score: 257
  • Evalue 3.80e-65
choline dehydrogenase id=12552939 bin=BDI species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 33.6
  • Coverage: 459.0
  • Bit_score: 222
  • Evalue 7.40e-55

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Taxonomy

Bordetella pertussis → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
ATGCGTTCGTGTAAGCGCCGCGAGGTCGCGTCCGATCAGGCCGGTATCCATACGCCCGACGCGTACATCGGCATGCTCGAGAAGCGCACGCAGGAACGCCGCATTCACGCGCGGGCCCGCAACGACGAGCTGCTTGAGAACAGCCACCATCGCATCGGCCGCCTCGTCGCGCGTCGCACCGTGCGTGATGAGCTTGGCGATCATGCTGTCATAGAAGGGCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGGCATCGTCAGGCAGCGCGAACGCCGCAATCCGCCCGATGCTCGGCAGGAAGCCCTGCGCCGGGTCCTCCGCGCAAAGCCGCACCTCGATGGCGTGGCCGTGCATGGTGATGGCGCCTTGCTCGAGCGGCAGCGGCTCGCCCGACGCCACGCGAAGCTGCCACTCGACGAGATCGAGCCCGGTGATCGCTTCCGTCACCGGATGCTCGACCTGGAGACGTGTGTTCATCTCGATGAAGTACCACGGCGCTTCGGGCCCGAGACTGCCGCCCTCGACGAGGAACTCGACGGTGCCCGCCCCCTCATAGCCGACAGCGCGCGCGAGGCTGACGGCCGCCCCGCACATCTTCTCACGCAGCGCCACGCTCATGCCCGGAGCCGGCGCCTCCTCGATGACTTTCTGGTTGCGCCGCTGGAGCGAGCAGTCGCGCTCGAAAATGTGCACGACATTGCCGTGGCGGTCGCCGAACACCTGCACCTCGACGTGGCGCGGCTGCTGCACGACCTTCTCGATCAGGACGGCGGCATCACCGAACGACGAGAGGGCTTCACGCTGCGCGCTCTCCAGCGCCGCCGCGAACTGCTCGCCGCTTTCGACGAGCCGCATGCCGCGACCACCGCCGCCTGCCACGGCCTTGATCATCACCGGATAGCCGATGCGGTCGGCTTCGCGCCGGAGCAGCGCGGGTGTCTGGTCGGCGCCATCATATCCCGGCACGACGGGCACACCGGCCGCGCGCGCGACTGCCTTGGCGGCCGCCTTGCCGCCGAGCTGGCGCATAGATGCGCCAGAGGGGCCGATGAAAACGAGGCCCGCTGCTTTGCAGGCATCGGCGAAGTCGGCGTTCTCGGCGAGGAAGCCGTACCCCGGATGAATTGCCTCGGCGCCCGTCGCCTGCGCGGCGGCGATGACGCGATCAATGCGCAGATAGCTTTCCGTCGAGGGCGAGGGACCAATGTGCACGGCCTCGTCGGCCGTCGCCACGTGAAGAGCCTCGCGGTCGGCATCCGAGTACACAGCCACGGTCGCCACGCCGAGCCGGCGCGCCGTGCGCATGATCCGGCACGCGATCTCACCGCGGTTGGCGATCAGGATCTTTTTCAGCATCAGCGCACCCTTCGTCCGGGCGGCAGGTAG
PROTEIN sequence
Length: 468
MRSCKRREVASDQAGIHTPDAYIGMLEKRTQERRIHARARNDELLENSHHRIGRLVARRTVRDELGDHAVIEGRXXXXXXXXXXXXXXLGIVRQRERRNPPDARQEALRRVLRAKPHLDGVAVHGDGALLERQRLARRHAKLPLDEIEPGDRFRHRMLDLETCVHLDEVPRRFGPETAALDEELDGARPLIADSAREADGRPAHLLTQRHAHARSRRLLDDFLVAPLERAVALENVHDIAVAVAEHLHLDVARLLHDLLDQDGGITERREGFTLRALQRRRELLAAFDEPHAATTAACHGLDHHRIADAVGFAPEQRGCLVGAIISRHDGHTGRARDCLGGRLAAELAHRCARGADENEARCFAGIGEVGVLGEEAVPRMNCLGARRLRGGDDAINAQIAFRRGRGTNVHGLVGRRHVKSLAVGIRVHSHGRHAEPARRAHDPARDLTAVGDQDLFQHQRTLRPGGR*