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SCNpilot_expt_1000_bf_scaffold_2945_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 1511..2269

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane transcriptional regulator (Anti-sigma factor) n=1 Tax=Microvirga sp. WSM3557 RepID=I4YKK1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 258.0
  • Bit_score: 196
  • Evalue 4.00e-47
Putative transmembrane transcriptional regulator (Anti-sigma factor) {ECO:0000313|EMBL:EIM24493.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 258.0
  • Bit_score: 196
  • Evalue 5.60e-47
putative transmembrane anti-sigma factor similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 252.0
  • Bit_score: 189
  • Evalue 1.20e-45

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGCGCTGTGAAGACGTACAGAACGAGCTCAGCCCCTACCTTGATGGCGCGCTGCCCATCGAGCAGCAGAAAGCTATCGGGAGCCATCTCGAAGCCTGCCGGCGGTGCGCCGCTCATCTCGATGACTATCGACGCATAGGGCGGACGCTCAGAGAGAAAGTCATCGAGAGAGCACCGGCCGGCCTGCAAGAGCGGATTCGCGCGGAGCTCGAGAAGGAAGAGCACGAGCAGAGCCGCGGCGCCCCGTGGCAGAGCAGACGCTTTGTCGCCCAGGCCGCAGCCCTCCTCCTCGTCGCTGGCCTCTCTGGAGCCGGCGGGTGGATCGCCGCTACGACGGGCTCACGCACACCGCCCCTTGCGCACGATGTGATGACCGCGCACGTGCGCTCGTTGCTTCAGGACAATCTCATGCAGGTGGCTTCATCGGATCAGCATACCGTGAAGCCCTGGTTCGCCGGGCGCCTCGATTTTGCGCCTCCAGTTCAGGACCTCGCCACGCAAGGCTTCGCACTGAAGGGTGGTCGGCTCGACTATGTCGGAAGCCGACGCGTCGCCGCCGTGATCTATATGCGCCGGCAGCATGTGATCAACGTCTTCACATGGCCGTCCGATCCATCACATCCCCTGCCCTCGCTGTCACAGTCCTCGAACGGCTATAACTCGGTCCGCTGGACGAGCGGCGGGATGGTCTATTGGGCGGTCTCGGACTTGAACATGAAAGAGCTCGGCGAATTCCAGGCGCTGCTCAGCGCCGCCTGA
PROTEIN sequence
Length: 253
MRCEDVQNELSPYLDGALPIEQQKAIGSHLEACRRCAAHLDDYRRIGRTLREKVIERAPAGLQERIRAELEKEEHEQSRGAPWQSRRFVAQAAALLLVAGLSGAGGWIAATTGSRTPPLAHDVMTAHVRSLLQDNLMQVASSDQHTVKPWFAGRLDFAPPVQDLATQGFALKGGRLDYVGSRRVAAVIYMRRQHVINVFTWPSDPSHPLPSLSQSSNGYNSVRWTSGGMVYWAVSDLNMKELGEFQALLSAA*