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SCNpilot_expt_1000_bf_scaffold_3048_curated_13

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 10065..10661

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003819131 similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 197.0
  • Bit_score: 315
  • Evalue 3.50e-83
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:EJZ29351.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 199.0
  • Bit_score: 318
  • Evalue 5.90e-84
putative transporter dctQ related transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 190.0
  • Bit_score: 238
  • Evalue 1.70e-60

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Taxonomy

Bradyrhizobium sp. CCGE-LA001 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGAAAAACTTCCTCTTCTTCATCGACTCCCTCAGCACGTGGACCGGCAAGGCCTTCGCCTGGCTCATCATGGTTCTCACGCTTGGCGTCAGCTACGAAGTCCTTGTGCGCTATGCGTTCCGAGCGCCGACCACCTGGGCCTTCGACTTCAGCTACATCAACTACGGCGCGATGTTCCTGATGGCCGGTGCCTATACGCTCTCACGCGGCGGCCACGTCCGCGCCGACGTCGTCTATCGCTTCCTCAAACCGCGAACGCAGGCGAGCGTAGACCTCATCCTCTACGTGATCTTCTTCCTGCCGGCGGTCGCTGCCCTGATCTATTCGGGCTGGAAGTACGCGGCGACCTCGATCCGCTTCAAGGAAGTAAGCATCTTCAGCCCGGCGGGCATTCCGATCTTTCCGCTGAAGACCCTGATCCCCGTGACCGGCGTGCTCCTGCTGCTGCAGGGCGCTGCCGAGATCATCCGCTGCATCATTTGCATCCGCGAAGGAAGCTGGCCGCAGCGGCTGCACGACGTGGAGGAGACCGAGAGCGTCATCATTCGAGAAAAACAACAGGAGCAACTGCTCCACGATCCGTCGAAGGGGGGCTAA
PROTEIN sequence
Length: 199
MKNFLFFIDSLSTWTGKAFAWLIMVLTLGVSYEVLVRYAFRAPTTWAFDFSYINYGAMFLMAGAYTLSRGGHVRADVVYRFLKPRTQASVDLILYVIFFLPAVAALIYSGWKYAATSIRFKEVSIFSPAGIPIFPLKTLIPVTGVLLLLQGAAEIIRCIICIREGSWPQRLHDVEETESVIIREKQQEQLLHDPSKGG*