ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4071_curated_2

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 1374..3746

Top 3 Functional Annotations

Value Algorithm Source
NAD-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 785.0
  • Bit_score: 833
  • Evalue 4.80e-239
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 785.0
  • Bit_score: 833
  • Evalue 2.20e-238
DNA ligase n=1 Tax=Hirschia maritima RepID=UPI00036AC42A similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 783.0
  • Bit_score: 834
  • Evalue 1.20e-238

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hirschia baltica → Hirschia → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2373
ATGAGCAAGAAAGCCGCGGCCACTGTTCCGCCTGAGAAACTCACCTCCCGCCAGGCTACGGCCGAGCACAAGAAGCTCGTGGCCGAAATTGCGCGCCACGACGCCCTCTACTACCAGCAGGACGCGCCGGCGATCTCCGACGCCGAGTACGACGCACTGCGCACGCGCCTCACCGCGATCGAGGCGCAATTTCCGGATCTCGCGGCTGAAAGTCCCACGCAGCGCGTCGGCGCGGCGCCGGTCGAAGCCTTCGGCAAAGTGCGCCACGAAGTGCCGATGCTTTCGCTCGGCAATGCTTTCTCGAGCGAGGAGGTGGCCGAATTCGTCGAGCGCGTGCGTCGCTTTCTAGCGCTCAGGGCGGACGATCCGCTCGTCGTTACGGCAGAGCCTAAGATAGATGGCCTCTCGATCTCCATCCGCTACGAGGAGGGGCAGCTCGTCAGGGCGGCGACCCGCGGCGATGGCATCGAGGGCGAGGACGTCACGACCAACATCCGCACGGTCCGCGAGATCCCGCATGTGCTCAAGGGCGCGGGCGTGCCTGACTTGATCGAGATCCGCGGCGAGATCTACCTTGGTACCGAGGATTTCCGCCGTCTCAATGCGGCGCAGGCCGATGCCGGCGGCAAGGTTTTCGCCAATCCACGCAATGCCGCCGCAGGCTCGCTGCGCCAGCTCGACGCGAGCATCACGGCCAAGCGTCCGCTGCGCTTCTTCGCCTATACCTGGGGCGCGGCCTCAGCGCTGCCGGCTAAGACCCAGTTCGATGTAGTGCACGCGTTCGCGAAGTGGGGGCTGCCGATCAACCCGCGCACCGTACGCTGCTCGAGCGTCGAGGAACTGATCGCCTTCTACGACACGATCGCCATCGATCGCGCGAGTCTCGGCTACGACATCGACGGCGTCGTCTACAAGGTCGATCGGCTCGACTACCAGGAGCGCCTTGGTTTCGTCTCGCGGAGCCCGCGATGGGCGACCGCGCATAAGTTCGCAGCCGAGCAGGCGACGACGGTGCTGCAGGACATCGAGATCCAGGTCGGGCGCACGGGAGCACTGACGCCGGTCGCCAAGCTGCAGCCGGTGACGGTCGGCGGCGTCGTCGTCTCGAATGCGACGCTGCACAACGAGGATGAGATCCGCCGCAAGGACATCCGCATCGGCGACACGGTCGTCGTGCAGCGGGCCGGCGACGTCATTCCGCAGGTCGTGAGCGTCATTGCCGAGCGGCGGCCGCACGGCGCGAAGCCCTTCAAGTTCCCGCACACATGTCCTGTCTGCGGCAGCCATGCGGCGCGCGACGAGGGCGAGGAGGGCGGCGAGGCCGAGGCCGTACGACGCTGCACGGGCGGGCTCATTTGTCCGGCGCAGGCCAAGGAGCGGCTCAAGCACTTCGTCTCGCGGCTCGCCTTCGACATCGAGGGACTTGGCGGCGAGCGCATCGAGCTCTTCTACGACGAGGGCCTGATCCGCGCCCCGGCGGATATCTTCACGCTCGCCCGCCGCGATGCCGCGAGCGACAACCCACTCGCGGAACGCAAGGGCTTCGGCGAGAAATCCATCCAGAACCTCTTTCGCGCCATCGACGCGCGCCGCCGCATCGGCCTCGAGCGCTTTCTCTTCGCGCTCGGCGTCCGCCATGTCGGCGAGACCACAGCGCGGGATCTCGCGCGCGCTTTCGGCACGTACGAGACTTTTCGCACGCAGGTCGATCTCGCGTCCAAGGCGCGCCCAGGCGCGAGCTACCGCCGCCTCGTGACGGCCAAGGGGCTCGGCCCCAAGACCGCCGAGACGCTCATGCAGGCGATCGCGGCGCGCGGCCGCGAGGATCTCTTCGACGGCGCGCCCGAAACCTTCGAGCTGGCGATCGCGGGCATCAAAGGCGTGCGTACGGGCGTGGCCGAGGCACTTGCGCGCGCGTTTCCCGATGTTGCGACATTCATCGAGACAGCACGATCGGCGGCGCGCGAGATGCCGGGCGATGATTATCGCGCCTTCGCGGGCCTCAGCGGCATCGGCGAGGTGGTCGCCGACTCGCTGATCGACTTCTTCGATGAGCCGCACAACCAGAAGGTCGTCGCGGATCTCTTGAGCGAGATCGAGATCCAGGCCTACGTGCGCCAGGCGACCGTCGCCTCTGCAGTCACGGGCAAGACCGTCGTGTTCACCGGCACGCTCGAGAAGATGTCGCGCAACGAGGCCAAGGCGAAAGCCGAGCGCGCCGGCGCCAAGGTCGCAAGCTCCGTCTCCAACAAGACCGACTACGTGATCGCCGGCGCTGAGGCCGGCTCCAAGCTCGATAAAGCGCGCGAGCTCGGTGTCACCGTTCTCAATGAGGATGAATGGCTGGCCCTCATCGAGGGCGGCGCAGGCTAG
PROTEIN sequence
Length: 791
MSKKAAATVPPEKLTSRQATAEHKKLVAEIARHDALYYQQDAPAISDAEYDALRTRLTAIEAQFPDLAAESPTQRVGAAPVEAFGKVRHEVPMLSLGNAFSSEEVAEFVERVRRFLALRADDPLVVTAEPKIDGLSISIRYEEGQLVRAATRGDGIEGEDVTTNIRTVREIPHVLKGAGVPDLIEIRGEIYLGTEDFRRLNAAQADAGGKVFANPRNAAAGSLRQLDASITAKRPLRFFAYTWGAASALPAKTQFDVVHAFAKWGLPINPRTVRCSSVEELIAFYDTIAIDRASLGYDIDGVVYKVDRLDYQERLGFVSRSPRWATAHKFAAEQATTVLQDIEIQVGRTGALTPVAKLQPVTVGGVVVSNATLHNEDEIRRKDIRIGDTVVVQRAGDVIPQVVSVIAERRPHGAKPFKFPHTCPVCGSHAARDEGEEGGEAEAVRRCTGGLICPAQAKERLKHFVSRLAFDIEGLGGERIELFYDEGLIRAPADIFTLARRDAASDNPLAERKGFGEKSIQNLFRAIDARRRIGLERFLFALGVRHVGETTARDLARAFGTYETFRTQVDLASKARPGASYRRLVTAKGLGPKTAETLMQAIAARGREDLFDGAPETFELAIAGIKGVRTGVAEALARAFPDVATFIETARSAAREMPGDDYRAFAGLSGIGEVVADSLIDFFDEPHNQKVVADLLSEIEIQAYVRQATVASAVTGKTVVFTGTLEKMSRNEAKAKAERAGAKVASSVSNKTDYVIAGAEAGSKLDKARELGVTVLNEDEWLALIEGGAG*