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SCNpilot_expt_1000_bf_scaffold_4071_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4071_curated_1
unknown

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604..1302
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SGF7_9RHIZ
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922, ECO:0000313|EMBL:CPR22549.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
outer membrane assembly lipoprotein YfiO; K05807 putative lipoprotein
SCNpilot_expt_1000_bf_scaffold_4071_curated_2
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1374..3746
DNA (2373bp) protein (791aa)
NAD-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2]
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418).;"
DNA ligase n=1 Tax=Hirschia maritima RepID=UPI00036AC42A
SCNpilot_expt_1000_bf_scaffold_4071_curated_3
unknown

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3703..3900
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4071_curated_4
unknown

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comp(3824..4549)
DNA (726bp) protein (242aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4071_curated_5
unknown

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comp(4555..4764)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4071_curated_6
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4901..5437
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SCW8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHB48317.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4071_curated_7
unknown

Not on your lists

5578..5766
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4071_curated_8
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5951..6856
DNA (906bp) protein (302aa)
Probable alpha-L-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_01552}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_01552};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036CE007
30S ribosomal protein S6; K05844 ribosomal protein S6 modification protein
Displaying 8 items

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