ggKbase home page

SCNpilot_expt_1000_bf_scaffold_12059_curated_12

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(8760..8963)

Top 3 Functional Annotations

Value Algorithm Source
transketolase central region; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 68.0
  • Bit_score: 97
  • Evalue 2.10e-18
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 68.0
  • Bit_score: 97
  • Evalue 9.50e-18
Transketolase central region n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IB78_BEII9 similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 68.0
  • Bit_score: 97
  • Evalue 6.80e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Beijerinckia indica → Beijerinckia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
GTGTGCGATGCCCATCCGACGACGCTGTCGTGGATCGGCTCGGTGCACGGCCATCGCGTGCGCGCGCTCGGCGTCGAGCACTTCGGCCAGTCAGGATCGATCCAGGAGCTCTACGCGCACTACGGCCTCGACGTGGAGGCGATCCTCGCGGCGGCCGAAGGCATCATCGGGCGGCCCGTACGCTATCGCCATCGCGTAGCCTGA
PROTEIN sequence
Length: 68
VCDAHPTTLSWIGSVHGHRVRALGVEHFGQSGSIQELYAHYGLDVEAILAAAEGIIGRPVRYRHRVA*