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SCNpilot_cont_1000_p_scaffold_1504_curated_2

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: 439..1464

Top 3 Functional Annotations

Value Algorithm Source
holA; DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta [EC:2.7.7.7] similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 344.0
  • Bit_score: 284
  • Evalue 6.20e-74
DNA polymerase III, delta subunit n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSL5_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 344.0
  • Bit_score: 284
  • Evalue 2.00e-73
Putative DNA polymerase III subunit delta {ECO:0000313|EMBL:CCQ75606.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.0
  • Coverage: 328.0
  • Bit_score: 291
  • Evalue 1.70e-75

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Taxonomy

Magnetospira sp. QH-2 → Magnetospira → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1026
ATGATCGTCAAGAATCACGAAGCCGACCGCTTTGTCGCCGCGCCCCCGAAGACGCTGGCGGCGGCGCTGGTCTATGGCCCCGATGCCGGGCTGGTGCAGGAGCGTGCCGAAAAGCTCGCCAGGCAGGTGGTCCCCGACCTGACCGATCCCTTCAATGTCGCCGATTTCAACGAGACGGCGCTCCTGGCCGATCCGGCGCGCCTGGCAGACGAGGCCGCCGCCATCTCCATGATGGGCGGGCGCCGGGTGGTGCGGGTGCGCGGCGCGACCAACGCCAGTGCCGAGATTTTTGAAACACTGCTGTCCAATATCAAGGGCGATGCGCTGGTGGTGGCGGAAGCGGGCGACCTGGCCAAGACGGCGGCGCTGCGCAAGCTGTTCGAAAGCCAGAACCACGCCGCCGCCATCGCCTGCTATCCCGACTCGGCGCGCGATCTGGCCGATGTGGTGCGCGACGGCCTGCGGGCAGAGGGCCTTTCCATCACCCCGGACGCGCTGGAAGACGCGGTATCGCGGCTGGGCTCAGATCGCGGCGTCACAAGGCGCGAACTGGAAAAGCTGGCGCTTTATGCCAGAGGCCAGGACAAGGTCACCATCGACGATGTCCGCGCAGTGATGGGCGACGAGGCCGAGGCGCGCAGCGAGGCCGCCAGTGACGCGGCGGGCACTGGCGATTTCGCCCGCCTGGACCGCGAGCTGGAACGGCTGTGGACCGCCGATGTGGCACCCGCCCAGATCATCCGCAGCGCCATGGGCCATTTCCAGAAACTGCTGATGGTGCGCGAATTGACCCAGCGCGGCGAGCCATTGGATGTGGCACTGAAAAAACTGCGCCCGCCACTTCACTTCTCCCGCGCCGCCAGCTTCAAGGCCCAGGCCCAGCGCTGGACCGGCGACCGGCTGGGTGAGGCACTGGACCTGTTGCTGGACGCCGAGGTCCAGACCCGCACGACCGGCGTGCCGGCCGAGGCGGTCACCGCACGTACCCTGATGAATATCGCCGCCATGGCCAAAGGAAGGGCCTAG
PROTEIN sequence
Length: 342
MIVKNHEADRFVAAPPKTLAAALVYGPDAGLVQERAEKLARQVVPDLTDPFNVADFNETALLADPARLADEAAAISMMGGRRVVRVRGATNASAEIFETLLSNIKGDALVVAEAGDLAKTAALRKLFESQNHAAAIACYPDSARDLADVVRDGLRAEGLSITPDALEDAVSRLGSDRGVTRRELEKLALYARGQDKVTIDDVRAVMGDEAEARSEAASDAAGTGDFARLDRELERLWTADVAPAQIIRSAMGHFQKLLMVRELTQRGEPLDVALKKLRPPLHFSRAASFKAQAQRWTGDRLGEALDLLLDAEVQTRTTGVPAEAVTARTLMNIAAMAKGRA*