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SCNpilot_cont_1000_p_scaffold_1282_curated_14

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: 11144..11512

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 n=1 Tax=Catelliglobosispora koreensis RepID=UPI000376EAC9 similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 125.0
  • Bit_score: 163
  • Evalue 1.10e-37
RNA polymerase sigma70 {ECO:0000313|EMBL:ETK31129.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 120.0
  • Bit_score: 162
  • Evalue 3.30e-37
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 118.0
  • Bit_score: 155
  • Evalue 9.10e-36

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATGACAATGCGTGACTGGCAAGAACTGACTGCGCTCACCCGGGGCGCCCCCCTGGTGGTGGAGCGGGTGCGAATGGGCGATATCGCCATCGAAGGGGCATTCGAATTGCCTCAACTCGCCCGCCTCACCATGGAGGACCAAGTGTTCATCGCCGCCTTCCTCAAGAGCCACGGCTCGATCAAGGAGATGGAGCAGGTCTTCGGTATCTCCTATCCCACCGTCAAGGCGCGATTGAACCGCATCGCCGGCCAGCTGGAATTTATCGAGACCGATGTGGCGCCCGCGCCGTCGCGGGGCGGAATTCTCGACCGGCTGGAGCGCGGCGAGATCGACGCCGCCACCGCCATCCGCGAACTGGAGGCACGATGA
PROTEIN sequence
Length: 123
MTMRDWQELTALTRGAPLVVERVRMGDIAIEGAFELPQLARLTMEDQVFIAAFLKSHGSIKEMEQVFGISYPTVKARLNRIAGQLEFIETDVAPAPSRGGILDRLERGEIDAATAIRELEAR*