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SCNpilot_cont_1000_p_scaffold_1282_curated

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1282_curated_1
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..590)
DNA (588bp) protein (196aa)
Glyoxylate reductase {ECO:0000313|EMBL:GAM97479.1}; EC=1.1.1.79 {ECO:0000313|EMBL:GAM97479.1};; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
lactate dehydrogenase and related dehydrogenase; K00015 glyoxylate reductase [EC:1.1.1.26]
Glyoxylate reductase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F8Q1_9PROT
SCNpilot_cont_1000_p_scaffold_1282_curated_2
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

688..1185
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TYX6_9PROT
Conserved protein {ECO:0000313|EMBL:GAK43830.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1282_curated_3
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1214..2812)
DNA (1599bp) protein (533aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
Bifunctional purine biosynthesis protein PurH n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SKN1_9RHOB
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhibens ISM.;"
SCNpilot_cont_1000_p_scaffold_1282_curated_4
unknown

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comp(2849..3031)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1282_curated_5
Acetobacter tropicalis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3045..4091)
DNA (1047bp) protein (349aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=749388 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter tropicalis NBRC 101654.;"
bioB; biotin synthetase (EC:2.8.1.6)
Biotin synthase n=1 Tax=Acetobacter tropicalis NBRC 101654 RepID=F7VC17_9PROT
SCNpilot_cont_1000_p_scaffold_1282_curated_6
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4498..5568
DNA (1071bp) protein (357aa)
Catalase domain-containing protein; K03781 catalase [EC:1.11.1.6]
Catalase-related peroxidase {ECO:0000256|PIRNR:PIRNR000296}; EC=1.11.1.- {ECO:0000256|PIRNR:PIRNR000296};; Flags: Precursor;; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phytofirmans (strain DSM 17436 / PsJN).;"
Catalase-related peroxidase n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2T9B5_BURPP
SCNpilot_cont_1000_p_scaffold_1282_curated_7
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5565..6113
DNA (549bp) protein (183aa)
cytochrome B561 n=1 Tax=Burkholderia bryophila RepID=UPI00036B0FF6
cytochrome B561
Cytochrome B561 {ECO:0000313|EMBL:ACD19348.1}; Flags: Precursor;; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phytofirmans (strain DSM 17436 / PsJN).;"
SCNpilot_cont_1000_p_scaffold_1282_curated_8
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6165..6701
DNA (537bp) protein (179aa)
GlcG n=2 Tax=Alcaligenes RepID=M5IYF8_9BURK
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
SCNpilot_cont_1000_p_scaffold_1282_curated_9
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6819..7193)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4QVG3_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ83143.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1282_curated_10
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7426..8319
DNA (894bp) protein (298aa)
ABC transporter permease n=1 Tax=Asaia sp. SF2.1 RepID=V8A789_9PROT
ABC transporter permease {ECO:0000313|EMBL:KJF65956.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
ABC transporter membrane spanning protein
SCNpilot_cont_1000_p_scaffold_1282_curated_11
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8319..8789
DNA (471bp) protein (157aa)
Glr0296 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NNW2_GLOVI
acetyltransferase
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_1000_p_scaffold_1282_curated_12
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8786..9568)
DNA (783bp) protein (261aa)
3-hydroxybutyrate dehydrogenase; K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
cytochrome C biogenesis protein CcmE n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000308FF4C
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:EIM27432.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
SCNpilot_cont_1000_p_scaffold_1282_curated_13
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9687..11063
DNA (1377bp) protein (459aa)
MFS transporter n=1 Tax=Burkholderia sp. JPY251 RepID=UPI00037B6B64
Major facilitator superfamily transporter {ECO:0000313|EMBL:GAN78377.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
major facilitator superfamily protein; K08369 MFS transporter, putative metabolite:H+ symporter
SCNpilot_cont_1000_p_scaffold_1282_curated_14
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11144..11512
DNA (369bp) protein (123aa)
RNA polymerase sigma70 n=1 Tax=Catelliglobosispora koreensis RepID=UPI000376EAC9
RNA polymerase sigma70 {ECO:0000313|EMBL:ETK31129.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1282_curated_15
unknown

Not on your lists

11509..11787
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1282_curated_16
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11799..12212
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7BTW8_STRBB
Uncharacterized protein {ECO:0000313|EMBL:AHI01445.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1282_curated_17
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12258..13097
DNA (840bp) protein (280aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
UPI0003CEC6FB related cluster n=1 Tax=unknown RepID=UPI0003CEC6FB
hypothetical protein; K07115
SCNpilot_cont_1000_p_scaffold_1282_curated_18
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13141..13587
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F0Y4_ACIC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO31779.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
SCNpilot_cont_1000_p_scaffold_1282_curated_19
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13622..14101
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QP19_9ZZZZ
putative thiol-disulfide interchange protein
Putative thiol-disulfide interchange protein {ECO:0000313|EMBL:ACO31329.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
SCNpilot_cont_1000_p_scaffold_1282_curated_20
RIFCSPLOWO2_12_FULL_Gammaproteobacteria_52_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15118..16215
DNA (1098bp) protein (366aa)
Anti-FecI sigma factor, FecR n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XPM9_HIRBI
anti-FecI sigma factor FecR; K07165 transmembrane sensor
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_52_10_curated
SCNpilot_cont_1000_p_scaffold_1282_curated_21
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16819..19764
DNA (2946bp) protein (982aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K4G3_9SPHN
TonB-dependent receptor-like protein
Tax=GWF1_Sphingomonadales_63_6_curated
SCNpilot_cont_1000_p_scaffold_1282_curated_22
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19944..23021)
DNA (3078bp) protein (1026aa)
Heavy metal efflux pump, cobalt-zinc-cadmium n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B374_9RHIZ
heavy metal efflux pump, cobalt-zinc-cadmium
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGK57438.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_1000_p_scaffold_1282_curated_23
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23026..23997)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BBV1_9RHIZ
hypothetical protein
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:CEG10677.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_cont_1000_p_scaffold_1282_curated_24
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24014..25039)
DNA (1026bp) protein (342aa)
Gluconolactonase family protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YHQ6_9PROT
Gluconolactonase family protein {ECO:0000313|EMBL:EKM98431.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
40-residue YVTN family beta-propeller repeat-containing protein
SCNpilot_cont_1000_p_scaffold_1282_curated_25
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25167..25556)
DNA (390bp) protein (130aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
Signal transduction histidine kinase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0H1I7_RHILT
integral membrane sensor signal transduction histidine kinase
Displaying 25 items

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