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SCNpilot_cont_500_bf_scaffold_4690_curated_16

Organism: scnpilot_dereplicated_Alphaproteobacteria_7

partial RP 26 / 55 BSCG 24 / 51 ASCG 3 / 38
Location: 13905..14510

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE4837 related cluster n=1 Tax=unknown RepID=UPI0003CE4837 similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 182.0
  • Bit_score: 233
  • Evalue 1.40e-58
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 182.0
  • Bit_score: 233
  • Evalue 7.40e-59
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:ESY86884.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 182.0
  • Bit_score: 233
  • Evalue 1.90e-58

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Taxonomy

Mesorhizobium sp. LNHC220B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGGGCAGTCGGCGGGAGTGATCGACGTGAACGTCAACCAATTGGACGGGCAGAACGGCGAGGTCGACTCGGTCGTAGCGCTGATACCTGCCCTGCGCGCCTTTGCGCGCTCGTTTTGCCGCAATCCGAACGATGCCGACGACCTGGTCCAGGAAACCCTGGTCAAGGCCATCGCCAATATCGACAAATATGAGGAAGGCACGCGCCTGAAATCGTGGCTGTTCACGATCATGCGCAACACCTTCTATACCCGGATTCGCGTCTCGAAACGCGAGGCGCCGGGCGACGCTGACTGTGTCGCCTCACAGCCGATCGTGCTTGCGACGCAGGAATGGACGTTGCGCGGCCAGGAGGTCGAGGCGGCCATCGAGCGCCTTTCGCCGTCCCATCGCGAGGTTCTGGTGCTCATCGGCATGCAGGGCGTCTCCTATGAGGAGGCCGCCGAAATCTGCGGCTGCGCCATCGGAACGGTGAAGAGCAGGCTCAACCGGGCGCGCGGCGCCGTGCTGGAAATGCTGGGCGAGCAGTCCGCAGGCGCCCTGGTCGAGTCCTCGGAATGGCTCGCCGGCGAGGCTTCGGCTTCGGGACGGGTCTCGCCGCGCTGA
PROTEIN sequence
Length: 202
MGQSAGVIDVNVNQLDGQNGEVDSVVALIPALRAFARSFCRNPNDADDLVQETLVKAIANIDKYEEGTRLKSWLFTIMRNTFYTRIRVSKREAPGDADCVASQPIVLATQEWTLRGQEVEAAIERLSPSHREVLVLIGMQGVSYEEAAEICGCAIGTVKSRLNRARGAVLEMLGEQSAGALVESSEWLAGEASASGRVSPR*