ggKbase home page

SCNpilot_cont_500_bf_scaffold_12350_curated_15

Organism: scnpilot_dereplicated_Alphaproteobacteria_7

partial RP 26 / 55 BSCG 24 / 51 ASCG 3 / 38
Location: 7054..7587

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Kaistia granuli RepID=UPI000377D525 similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 167.0
  • Bit_score: 284
  • Evalue 1.00e-73
Uncharacterized protein {ECO:0000313|EMBL:KKN73253.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 177.0
  • Bit_score: 268
  • Evalue 6.20e-69
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 177.0
  • Bit_score: 266
  • Evalue 5.30e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 534
ATGTCTCGTATTGGTAAGAAGCCGGTGGCGGTGCCCAAGGGCGTGACGGCCACCATCAATGGCCAGACGGTGTCGGTGAAGGGTCCGAAGGGCGAACTGTCCTTCGACTTCACGGATCACGTCTCGGTCGAACTCTCCGACAACGGCGTTTCGGTCGCGCCGCGCGATCAGTCCAAGGAGGCTCGCGCCGCCTGGGGCATGTCGCGGACGATGATCGCGAACCTGTTCAAGGGCGTGACCGAGGGCTTCTCGAAGAAGCTCGAGATCAACGGCGTCGGTTATCGCGCGGCCGTGCAGGGCCAGAACCTGCAGCTGGCTCTTGGCTACAGCCACGATGTGATCTATCCGATCCCGGCAGGCATCACGATTCAGTGCGCCAAGCCGACGGAGATCCTGGTGTCGGGCATCAACCGCCAGCAGGTCGGTCAGGTTGCCGCCGAGATCCGCGAGTTCCGCGGTCCCGAGCCCTACAAGGGCAAGGGCGTGAAATATGCGACCGAAACGATCTTCCGCAAGGAAGGCAAGAAGAAGTAA
PROTEIN sequence
Length: 178
MSRIGKKPVAVPKGVTATINGQTVSVKGPKGELSFDFTDHVSVELSDNGVSVAPRDQSKEARAAWGMSRTMIANLFKGVTEGFSKKLEINGVGYRAAVQGQNLQLALGYSHDVIYPIPAGITIQCAKPTEILVSGINRQQVGQVAAEIREFRGPEPYKGKGVKYATETIFRKEGKKK*