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SCNpilot_bf_inoc_scaffold_96_curated_8

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: 8100..8696

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma subunit, ECF family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T831_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 198.0
  • Bit_score: 292
  • Evalue 2.50e-76
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 198.0
  • Bit_score: 292
  • Evalue 7.70e-77
Tax=CG_Paludi_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 199.0
  • Bit_score: 298
  • Evalue 8.20e-78

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Taxonomy

CG_Paludi_01 → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 597
ATGAAAACACTGAATCAAGTAGCTGACGAAATGTTAGTTAAGTTATATGAGGAAGGAAATAATGAGGCATTTGAAGTTCTATTAAACCGTCACAAGTCAAAAGTATATTTCTATATTTTCAAGATTATACGTGACAAAGAACTCACAGAAGATATATTCCAGGATACCTTTGTTAAAGCAATAATGAGTATTCAGCAAGGTCGTTATGTAGAAACAGGCAAATTTATTGGCTGGATAACCCGTATTGCCCATAATCTAATTATCGATCACTTCAGAAAAGAAAAGAACGAGAATACATTTTCGTCGGACGATTACGAATTCGATATAATCAGCAACAATTCTAAAATTGCAGATTTGAGTATGGAAGATGTACTTTCAAACGAGCAAGTGCTGTTAGATGTTGTAAAAATGGTAGATTTCCTGCCTCCATTACAAAAAGAGGTAGTGCGTATGCGATTCTTTGAAGATTTAAGTTTCAAAGAAATAGCTGAAAAGACAGAAGTAAGCATCAACACTGCATTAGGCAGAATGCGTTATGCTTTGCTCAATATGAGAAAATTAGCAATTGAGAAAGATATTTATTTAGAAATAAAATAA
PROTEIN sequence
Length: 199
MKTLNQVADEMLVKLYEEGNNEAFEVLLNRHKSKVYFYIFKIIRDKELTEDIFQDTFVKAIMSIQQGRYVETGKFIGWITRIAHNLIIDHFRKEKNENTFSSDDYEFDIISNNSKIADLSMEDVLSNEQVLLDVVKMVDFLPPLQKEVVRMRFFEDLSFKEIAEKTEVSINTALGRMRYALLNMRKLAIEKDIYLEIK*