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scnpilot_expt_750_bf_scaffold_288_curated_20

Organism: scnpilot_dereplicated_Bacteroidetes_4

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(20805..21266)

Top 3 Functional Annotations

Value Algorithm Source
Two-component response regulator n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GM21_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 154.0
  • Bit_score: 226
  • Evalue 1.70e-56
Hydrogenase transcriptional regulatory protein hupR1 {ECO:0000313|EMBL:KHJ38678.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 154.0
  • Bit_score: 233
  • Evalue 2.50e-58
response regulator receiver protein similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 151.0
  • Bit_score: 214
  • Evalue 2.70e-53

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Taxonomy

Pedobacter glucosidilyticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 462
ATGTCGGATAAAATAACTATATTATACGTTGATGACGAGGAAAATAATCTAATTTCATTCAAAGCTACCTTTCGCCTTAAATACAAAATATTTACGGCCATAGGAGGGGAAGAAGCATTGAAGATATTAGAGGAAAATACCGTGCATATTATCATTACAGATCAGAGAATGCCTAATATGACGGGGACTGAATTTCTGGAGAAGGTTTTACATAAATATACAGATCCAATACGTATATTACTTACGGGATATACTGATATGAGTGCATTGGTAGAAGCGGTGAACAAGGGACAGATCTTTCATTACCTGACCAAACCATGGAGTGAAGAAGAGTTGGAACAAACCATTGAAAGGGCTTATGGTATCTACCTGGAAAGAGAGAAAATCAAACAGATGAACGAGAAACTTTCTCTTTCAAATGAGCAACTTGAATTTTTATTAAGACAAAAACTATTATCCTGA
PROTEIN sequence
Length: 154
MSDKITILYVDDEENNLISFKATFRLKYKIFTAIGGEEALKILEENTVHIIITDQRMPNMTGTEFLEKVLHKYTDPIRILLTGYTDMSALVEAVNKGQIFHYLTKPWSEEELEQTIERAYGIYLEREKIKQMNEKLSLSNEQLEFLLRQKLLS*