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scnpilot_p_inoc_scaffold_32_curated_67

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(82561..83940)

Top 3 Functional Annotations

Value Algorithm Source
Signal recognition particle protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQD6_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 440.0
  • Bit_score: 687
  • Evalue 7.90e-195
signal recognition particle protein; K03106 signal recognition particle subunit SRP54 similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 440.0
  • Bit_score: 687
  • Evalue 2.50e-195
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 440.0
  • Bit_score: 687
  • Evalue 1.10e-194

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1380
ATGTTTAATAATTTAAGTGAACGTCTTGACTCGGCGATTAAGAATTTAAAAGGACAGGGAAGCATTACCGAAATTAATGTGGCATCCACTATCAAGGAAATCAGAAGGGCTTTAGTAGATGCTGACGTTAACTATAAGATAGCTAAGGAGTTTACGGACAGGGTAAAGGATAAGGCATTGGGAGAAAAGGTGCTTACCGCGGTGTCCCCGGGTCAACTGATGGTGAAGATCGTAAAAGATGAGCTGGCGGACCTGATGGGCGGAGATGCGGTGGAAGTGGACCTGACAGCCAAGCCGACCGTTATCCTGATAGCGGGTCTGCAGGGTTCGGGTAAGACCACTTTTACGGGCAAGCTGTCCCATTACCTTAAATCCAAAAAGAATAAGAAAGTATTGATGGTTGCGGCGGATATTTACAGGCCGGCGGCTATCAACCAGATACATGTGCTGGGAGAGCAGATCAATGTGGATGTGTATTCAGAGCCGGAAAACAAGGATGCTGTCAGTATCGCGCAGCATGCCATAGACAAGGCCAAAGCGGAAAATTACGGGGTGGTGATCATAGATACTGCCGGGCGCCTGGCAGTGGATGAGGTGATGATGACGGAAGTGAAGCATATCAAGGACGCGGTGCAGCCGAAAGAGATACTCTTCGTAGTGGATTCCATGACGGGCCAGGATGCCGTAAATACGGCCAAAGCCTTTAATGACAGGCTGGACTTTACGGGTGTGGTGCTGACCAAGCTGGACGGCGATACCCGTGGCGGTGCCGCGCTGACCATCAAATACACCGTCAATAAGCCCATTAAATTCGTTTCCATGGGTGAAAAGCTGGATACGTTGGATGTGTTTTATCCGGACCGTATGGCGCAGCGTATTCTGGGGATGGGCGATATCATATCGCTCGTAGAGCGCGCGCAGGACCAGTTTGATGAGGAGCAGGCCAAGAAAATTGAGAAAAAGATCCGTGCCAATAAATTCGACTTTGACGATTTCAAGCAGCAACTGAACCAGATCAAGAAAATGGGCAGCATCAAAGATCTGCTGGCTATGATACCGGGTGTGGGCAAGGCTATTAAAGATATAGATATCAGCGATGACGCCTTTAAGGGAATAGAAGCAATGATAGATTCTATGACACCGGAAGAGCGAACCAATCCCGATATTATCACGCCTTCCCGCCGTAAGCGGATCGCTAAGGGAGCAGGTAAGGATATTGCGGAGATGAATGCTTTTATGAAGCAGTTTGACCAGATGCGGCAGATGATGAAGCAGATGAATAAGTTTAAAGGCATGCCCGGCCTGGGTGGACTGGCCGGCGGTATGGGCGGTATGAAAATGCCGGGCGGCTTCCCTCCCATGGGTGGTGGCATGAAGTAA
PROTEIN sequence
Length: 460
MFNNLSERLDSAIKNLKGQGSITEINVASTIKEIRRALVDADVNYKIAKEFTDRVKDKALGEKVLTAVSPGQLMVKIVKDELADLMGGDAVEVDLTAKPTVILIAGLQGSGKTTFTGKLSHYLKSKKNKKVLMVAADIYRPAAINQIHVLGEQINVDVYSEPENKDAVSIAQHAIDKAKAENYGVVIIDTAGRLAVDEVMMTEVKHIKDAVQPKEILFVVDSMTGQDAVNTAKAFNDRLDFTGVVLTKLDGDTRGGAALTIKYTVNKPIKFVSMGEKLDTLDVFYPDRMAQRILGMGDIISLVERAQDQFDEEQAKKIEKKIRANKFDFDDFKQQLNQIKKMGSIKDLLAMIPGVGKAIKDIDISDDAFKGIEAMIDSMTPEERTNPDIITPSRRKRIAKGAGKDIAEMNAFMKQFDQMRQMMKQMNKFKGMPGLGGLAGGMGGMKMPGGFPPMGGGMK*