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scnpilot_p_inoc_scaffold_32_curated

Search features with annotation key words

Displaying items 1-30 of 354 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_32_curated_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(617..1258)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036AFFB0
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_p_inoc_scaffold_32_curated_2
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1480..2490
DNA (1011bp) protein (337aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000256|HAMAP-Rule:MF_01685};; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
ferredoxin--NADP reductase n=1 Tax=Pedobacter agri RepID=UPI000299FD4E
scnpilot_p_inoc_scaffold_32_curated_3
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2510..2836
DNA (327bp) protein (109aa)
Ferrodoxin n=1 Tax=Pedobacter sp. BAL39 RepID=A6EKN1_9SPHI
Ferredoxin {ECO:0000313|EMBL:ETZ19536.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
ferredoxin; K04755 ferredoxin, 2Fe-2S
scnpilot_p_inoc_scaffold_32_curated_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3164..3688
DNA (525bp) protein (175aa)
Outer membrane transport energization protein ExbD n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF24_NIAKG
outer membrane transport energization protein ExbD
Outer membrane transport energization protein ExbD {ECO:0000313|EMBL:AEW02644.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_32_curated_5
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3700..4569
DNA (870bp) protein (290aa)
TonB family protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YFD0_9SPHI
TonB family protein {ECO:0000313|EMBL:EHQ27238.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
outer membrane transport energization protein TonB; K03832 periplasmic protein TonB
scnpilot_p_inoc_scaffold_32_curated_6
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4614..5384
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EHM1_RUNSL
Uncharacterized protein {ECO:0000313|EMBL:AHM59545.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
scnpilot_p_inoc_scaffold_32_curated_7
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5423..8344)
DNA (2922bp) protein (974aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000380DC54
Uncharacterized protein {ECO:0000313|EMBL:AHJ98880.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
hypothetical protein
scnpilot_p_inoc_scaffold_32_curated_8
unknown

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comp(8331..8474)
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_32_curated_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8594..9241
DNA (648bp) protein (216aa)
Putative phosphate transport regulator n=1 Tax=Niabella soli DSM 19437 RepID=H1NTH3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:GAO45091.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
putative phosphate transport regulator; K07220 hypothetical protein
scnpilot_p_inoc_scaffold_32_curated_10
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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9281..10726
DNA (1446bp) protein (482aa)
Phosphate transporter id=4204635 bin=GWF2_Bacteroidetes_38_335 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
phosphate transporter; K03306 inorganic phosphate transporter, PiT family
Tax=GWF2_Bacteroidetes_38_335_curated
scnpilot_p_inoc_scaffold_32_curated_11
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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10834..12303
DNA (1470bp) protein (490aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11YZ4_CYTH3
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_p_inoc_scaffold_32_curated_12
unknown

Not on your lists

comp(12663..13994)
DNA (1332bp) protein (444aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_32_curated_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14094..15404)
DNA (1311bp) protein (437aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Pontibacter roseus RepID=UPI000371729E
scnpilot_p_inoc_scaffold_32_curated_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15414..16085)
DNA (672bp) protein (224aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
deoxyribose-phosphate aldolase; K01619 deoxyribose-phosphate aldolase [EC:4.1.2.4]
deoxyribose-phosphate aldolase n=1 Tax=Niabella aurantiaca RepID=UPI00036C5B10
scnpilot_p_inoc_scaffold_32_curated_15
Capnocytophaga sputigena, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16104..16643)
DNA (540bp) protein (180aa)
Putative dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EEB66248.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EEB66248.1};; TaxID=553177 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sputigena ATCC 33612.;"
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
Putative dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=E2N1C1_CAPSP
scnpilot_p_inoc_scaffold_32_curated_16
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16859..17512
DNA (654bp) protein (218aa)
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Lipoprotein signal peptidase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDB1_CHIPD
scnpilot_p_inoc_scaffold_32_curated_17
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17564..18838
DNA (1275bp) protein (425aa)
Kynureninase {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800};; L-kynurenine hydrolase {ECO:0000256|HAMAP-Rule:MF_01970}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
kynureninase; K01556 kynureninase [EC:3.7.1.3]
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00035D4C9D
scnpilot_p_inoc_scaffold_32_curated_18
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18842..19483
DNA (642bp) protein (214aa)
Hydroxyacylglutathione hydrolase {ECO:0000313|EMBL:EOZ99286.1}; EC=3.1.2.6 {ECO:0000313|EMBL:EOZ99286.1};; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
Hydroxyacylglutathione hydrolase n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2E405_9BACT
beta-lactamase
scnpilot_p_inoc_scaffold_32_curated_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19978..22026
DNA (2049bp) protein (683aa)
peptidase M13 n=1 Tax=Niabella aurantiaca RepID=UPI00037192E9
Peptidase M13 {ECO:0000313|EMBL:AHF15270.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
putative metalloendopeptidase
scnpilot_p_inoc_scaffold_32_curated_20
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22336..23703)
DNA (1368bp) protein (456aa)
Nucleoside transporter n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VTU2_9SPHI
Nucleoside transporter {ECO:0000313|EMBL:EFK55721.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
nucleoside transporter
scnpilot_p_inoc_scaffold_32_curated_21
unknown

Not on your lists

23956..25149
DNA (1194bp) protein (398aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_32_curated_22
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25577..27544)
DNA (1968bp) protein (656aa)
b-glycosyltransferase (EC:2.4.1.-)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00036FA541
Glycosyl transferase family 2 {ECO:0000313|EMBL:KGE87334.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
scnpilot_p_inoc_scaffold_32_curated_23
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27773..28414
DNA (642bp) protein (214aa)
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIA8_CHIPD
outer membrane lipoprotein carrier protein LolA
Outer membrane lipoprotein carrier protein LolA {ECO:0000313|EMBL:ACU63670.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_32_curated_24
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28505..29140
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035C746A
Cell envelope biogenesis protein LolA {ECO:0000313|EMBL:AHF15898.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
outer membrane lipoprotein carrier protein LolA
scnpilot_p_inoc_scaffold_32_curated_25
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29115..29753
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAZ4_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59366.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_32_curated_26
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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29757..30125
DNA (369bp) protein (123aa)
3-hydroxymyristoyl/3-hydroxydecanoyl-(Acyl carrier protein) dehydratase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YTV0_AEQSU
(3R)-hydroxymyristoyl-ACP dehydratase
3-hydroxymyristoyl/3-hydroxydecanoyl-(Acyl carrier protein) dehydratase {ECO:0000313|EMBL:AFL80418.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
scnpilot_p_inoc_scaffold_32_curated_27
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

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31301..32563
DNA (1263bp) protein (421aa)
NHL repeat-containing protein
Peptidase domain protein id=2165728 bin=GWE2_Bacteroidetes_29_8 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
Tax=GWE2_Bacteroidetes_29_8_curated
scnpilot_p_inoc_scaffold_32_curated_28
unknown

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33380..33832
DNA (453bp) protein (151aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_32_curated_29
unknown

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33893..34351
DNA (459bp) protein (153aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_32_curated_30
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34975..40263)
DNA (5289bp) protein (1763aa)
Uncharacterized protein n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L1N8_ZOBGA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ97785.1}; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
Displaying items 1-30 of 354 in total

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