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scnpilot_p_inoc_scaffold_32_curated

Search features with annotation key words

Displaying items 331-354 of 354 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_32_curated_331
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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362176..363315
DNA (1140bp) protein (380aa)
Butyryl-CoA dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGE1_NIAKG
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KIC90204.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
butyryl-CoA dehydrogenase
scnpilot_p_inoc_scaffold_32_curated_332
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

363589..364608
DNA (1020bp) protein (340aa)
Uncharacterized protein n=2 Tax=Myroides odoratimimus RepID=H1GJX6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHO10244.1}; TaxID=883150 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CCUG 10230.;"
hypothetical protein
scnpilot_p_inoc_scaffold_32_curated_333
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

364755..365270
DNA (516bp) protein (172aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XU65_FLAIG
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
scnpilot_p_inoc_scaffold_32_curated_334
Prevotella multisaccharivorax, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

365298..366242
DNA (945bp) protein (315aa)
TonB-dependent receptor plug n=1 Tax=Prevotella multisaccharivorax DSM 17128 RepID=F8NBQ3_9BACT
TonB-dependent receptor plug {ECO:0000313|EMBL:EGN55929.1}; Flags: Precursor;; TaxID=688246 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella multisaccharivorax DSM 17128.;"
TonB-dependent receptor plug
scnpilot_p_inoc_scaffold_32_curated_335
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

366359..366754
DNA (396bp) protein (132aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AHQ2_FLELS
TonB-linked outer membrane protein, SusC/RagA family
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:AFM03487.1}; Flags: Precursor;; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 /; NCIMB 1366 / Sio-4).;"
scnpilot_p_inoc_scaffold_32_curated_336
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

366802..368607
DNA (1806bp) protein (602aa)
Putative outer membrane protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z6G8_FLABF
putative outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:CCB70995.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
scnpilot_p_inoc_scaffold_32_curated_337
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(368703..371213)
DNA (2511bp) protein (837aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000379B9CD
Uncharacterized protein {ECO:0000313|EMBL:AKD05519.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_32_curated_338
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

371331..371870
DNA (540bp) protein (180aa)
histidinol-phosphate phosphatase family protein; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D,D-heptose 1,7-bisphosphate phosphatase id=1808397 bin=GWE2_Bacteroidetes_29_8 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
Tax=GWE2_Bacteroidetes_29_8_curated
scnpilot_p_inoc_scaffold_32_curated_339
CG_Maritim_01, Maritimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(371874..372404)
DNA (531bp) protein (177aa)
thioredoxin n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI00025591CE
thioredoxin-like protein
Tax=CG_Maritim_01
scnpilot_p_inoc_scaffold_32_curated_340
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

372483..373052
DNA (570bp) protein (190aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-]
3-octaprenyl-4-hydroxybenzoate carboxy-lyase id=2201165 bin=GWB2_Bacteroidetes_32_14 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
scnpilot_p_inoc_scaffold_32_curated_341
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

373095..375389
DNA (2295bp) protein (765aa)
Two component regulator propeller domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFX6_CHIPD
two component regulator propeller domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_p_inoc_scaffold_32_curated_342
unknown

Not on your lists

comp(375581..375835)
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_32_curated_343
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

376053..377888
DNA (1836bp) protein (612aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J768_CYCMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL27701.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_p_inoc_scaffold_32_curated_344
Gramella forsetii, Gramella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

378014..379210
DNA (1197bp) protein (399aa)
transposase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003656A5F
mutator family transposase
Mutator family transposase {ECO:0000313|EMBL:CAL65984.1}; TaxID=411154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gramella.;" source="Gramella forsetii (strain KT0803).;"
scnpilot_p_inoc_scaffold_32_curated_345
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

379486..381561
DNA (2076bp) protein (692aa)
phenylacetic acid degradation protein paaN (EC:1.2.1.3); K02618 oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.7.1.16 1.17.1.7]
Phenylacetic acid degradation protein paaN n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAG6_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_32_curated_346
unknown

Not on your lists

381690..382181
DNA (492bp) protein (164aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_32_curated_347
unknown

Not on your lists

comp(382346..382489)
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_32_curated_348
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(382650..383189)
DNA (540bp) protein (180aa)
glutathione peroxidase; K00432 glutathione peroxidase [EC:1.11.1.9]
Glutathione peroxidase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CAC6_9FLAO
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
scnpilot_p_inoc_scaffold_32_curated_349
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

383338..383793
DNA (456bp) protein (152aa)
Peroxiredoxin (EC:1.11.1.15); K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003829E90
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_p_inoc_scaffold_32_curated_350
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

383848..384594
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH08_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00619.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_32_curated_351
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(384711..385376)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2JAN3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ59718.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
hypothetical protein
scnpilot_p_inoc_scaffold_32_curated_352
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(385480..386331)
DNA (852bp) protein (284aa)
1,4-dihydroxy-6-naphtoate synthase {ECO:0000256|HAMAP-Rule:MF_00996}; EC=4.1.-.- {ECO:0000256|HAMAP-Rule:MF_00996};; Menaquinone biosynthetic enzyme MqnD {ECO:0000256|HAMAP-Rule:MF_00996}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC1_CHIPD
hypothetical protein; K07083
scnpilot_p_inoc_scaffold_32_curated_353
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(386469..389123)
DNA (2655bp) protein (885aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
alaS; alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7]
Alanine--tRNA ligase n=1 Tax=Niabella soli DSM 19437 RepID=H1NSL2_9SPHI
scnpilot_p_inoc_scaffold_32_curated_354
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(389606..389959)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Pectobacterium carotovorum subsp. carotovorum (strain PC1) RepID=C6DJZ7_PECCP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHS75887.1}; TaxID=180957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. brasiliense.;"
Displaying items 331-354 of 354 in total

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