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scnpilot_p_inoc_scaffold_32_curated

Search features with annotation key words

Displaying items 211-240 of 354 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_32_curated_211
unknown

Not on your lists

242108..242290
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_32_curated_212
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

242529..243503
DNA (975bp) protein (325aa)
ribonucleotide reductase; K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
Ribonucleotide reductase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PTA9_CHIPD
Ribonucleotide reductase {ECO:0000313|EMBL:ACU60899.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_32_curated_213
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

243596..245299
DNA (1704bp) protein (568aa)
ribonucleotide-diphosphate reductase subunit alpha; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase, alpha chain {ECO:0000313|EMBL:ACU60898.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ACU60898.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Ribonucleoside-diphosphate reductase, alpha chain n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PTA8_CHIPD
scnpilot_p_inoc_scaffold_32_curated_214
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

245501..246646
DNA (1146bp) protein (382aa)
Phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K8Q0_9BACT
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_p_inoc_scaffold_32_curated_215
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(246743..247156)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KEG9_9FLAO
Membrane protein {ECO:0000313|EMBL:KFF19131.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_32_curated_216
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(247168..247515)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CH77_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL71524.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
hypothetical protein
scnpilot_p_inoc_scaffold_32_curated_217
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(247569..248069)
DNA (501bp) protein (167aa)
Putative transcriptional regulator n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JUM4_9FLAO
Transcriptional regulator {ECO:0000313|EMBL:KFC18187.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
transcriptional regulator protein-like protein
scnpilot_p_inoc_scaffold_32_curated_218
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(248228..248932)
DNA (705bp) protein (235aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PP25_CHIPD
winged helix family two component transcriptional regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACU58722.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_32_curated_219
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(248993..250141)
DNA (1149bp) protein (383aa)
MscS Mechanosensitive ion channel n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YG73_9SPHI
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:EHQ27337.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
mechanosensitive ion channel MscS; K16052 MscS family membrane protein YnaI
scnpilot_p_inoc_scaffold_32_curated_220
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

250287..250667
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP n=2 Tax=Myroides RepID=H1ZAB2_MYROD
Uncharacterized protein {ECO:0000313|EMBL:EKB04350.1}; TaxID=883155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides [odoratimimus] CIP 103059.;"
endoribonuclease L-PSP; K07567 TdcF protein
scnpilot_p_inoc_scaffold_32_curated_221
unknown

Not on your lists

250712..251548
DNA (837bp) protein (279aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_32_curated_222
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

251631..252305
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S229_9FLAO
Urease-associated protein {ECO:0000313|EMBL:KGO90627.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein
scnpilot_p_inoc_scaffold_32_curated_223
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

252313..252705
DNA (393bp) protein (131aa)
OsmC family protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IA58_FLUTR
Osmotically inducible protein OsmC {ECO:0000313|EMBL:KIA85805.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
OsmC family protein; K07397 putative redox protein
scnpilot_p_inoc_scaffold_32_curated_224
unknown

Not on your lists

252716..253228
DNA (513bp) protein (171aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_32_curated_225
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

253225..254334
DNA (1110bp) protein (370aa)
Glycosyl transferase group 1 n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SCH2_PEDSD
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADY52806.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_p_inoc_scaffold_32_curated_226
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

254336..255622
DNA (1287bp) protein (429aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003673921
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_p_inoc_scaffold_32_curated_227
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(255735..256382)
DNA (648bp) protein (216aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMI4_CHIPD
lysine exporter protein LysE/YggA
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:ACU58528.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_32_curated_228
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(256452..258032)
DNA (1581bp) protein (527aa)
peptide chain release factor 3 n=1 Tax=Segetibacter koreensis RepID=UPI00036D79B0
peptide chain release factor 3 (bRF-3); K02837 peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_32_curated_229
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(258180..258716)
DNA (537bp) protein (179aa)
Deoxycytidine triphosphate deaminase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KML0_SOLCM
deoxycytidine triphosphate deaminase
Deoxycytidine triphosphate deaminase {ECO:0000313|EMBL:AFD09001.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_p_inoc_scaffold_32_curated_230
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(258756..259271)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE99_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63308.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_32_curated_231
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

259481..261136
DNA (1656bp) protein (552aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
Glutamine--tRNA ligase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KL89_SOLCM
glutaminyl-tRNA synthetase
scnpilot_p_inoc_scaffold_32_curated_232
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(261185..262714)
DNA (1530bp) protein (510aa)
AMP-dependent synthetase and ligase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1E8_9SPHI
amp-dependent synthetase and ligase
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_32_curated_233
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(262711..263718)
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1E7_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ30281.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
scnpilot_p_inoc_scaffold_32_curated_234
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(263715..264398)
DNA (684bp) protein (228aa)
Putative phosphatidate cytidylyltransferase {ECO:0000313|EMBL:EFK59941.1}; EC=2.7.7.41 {ECO:0000313|EMBL:EFK59941.1};; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
Putative phosphatidate cytidylyltransferase n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VIN9_9SPHI
phosphatidate cytidylyltransferase
scnpilot_p_inoc_scaffold_32_curated_235
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(264395..265510)
DNA (1116bp) protein (372aa)
S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase-like protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TQ72_MARTH
s-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase-like protein; K13622 S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_32_curated_236
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

265615..266175
DNA (561bp) protein (187aa)
M20A family peptidase {ECO:0000313|EMBL:BAP32953.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
scnpilot_p_inoc_scaffold_32_curated_237
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

266341..266988
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029AB35C
Uncharacterized protein {ECO:0000313|EMBL:AHJ96582.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
hypothetical protein
scnpilot_p_inoc_scaffold_32_curated_238
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

267046..268518
DNA (1473bp) protein (491aa)
Peptidase S54, rhomboid domain protein {ECO:0000313|EMBL:ESU27504.1}; EC=3.4.21.105 {ECO:0000313|EMBL:ESU27504.1};; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
Peptidase S54, rhomboid domain n=1 Tax=Niabella soli DSM 19437 RepID=H1NNC3_9SPHI
hypothetical protein rbh
scnpilot_p_inoc_scaffold_32_curated_239
unknown

Not on your lists

comp(268895..269122)
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_32_curated_240
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(269183..269746)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W376_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFE99129.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
hypothetical protein
Displaying items 211-240 of 354 in total

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